SCOPe 2.04: Domain d4koma_: 4kom A:

Lineage for d4koma_ (4kom A:)

1. Root: SCOPe 2.04

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.19: Viral protein domain [49817] (1 superfamily)
   sandwich; 9 strands in 2 sheets; jelly-roll; form trimers

4. Superfamily b.19.1: Viral protein domain [49818] (4 families)
   forms homotrimers

5. Family b.19.1.2: Influenza hemagglutinin headpiece [49823] (2 proteins)

6. Protein Hemagglutinin [49824] (6 species)
   includes rudiment esterase domain

7. Species Influenza A virus, different strains [TaxId:11320] [49825] (99 PDB entries)

8. Domain d4koma_: 4kom A: [235201]
   Other proteins in same PDB: d4komb_
   automated match to d4kona_
   complexed with nag

Details for d4koma_

PDB Entry: 4kom, 2.6 Å

PDB Description: the structure of hemagglutinin from avian-origin h7n9 influenza virus in complex with avian receptor analog 3'slnln (neuacα2- 3galβ1-4glcnacβ1-3galβ1-4glc)

PDB Compounds: (A:) hemagglutinin HA1

SCOPe Domain Sequences for d4koma_:

Sequence; same for both SEQRES and ATOM records:

>d4koma_ b.19.1.2 (A:) Hemagglutinin {Influenza A virus, different strains [TaxId: 11320]}
iclghhavsngtkvntltergvevvnatetvertnipricskgkrtvdlgqcgllgtitg
ppqcdqflefsadliierregsdvcypgkfvneealrqilresggidkeamgftysgirt
ngatsacrrsgssfyaemkwllsntdnaafpqmtksykntrkspalivwgihhsvstaeq
tklygsgnklvtvgssnyqqsfvpspgarpqvnglsgridfhwlmlnpndtvtfsfngaf
iapdrasflrgksmgiqsgvqvdancegdcyhsggtiisnlpfqnidsravgkcpryvkq
rslllatgmknvpe

Timeline for d4koma_:

• d4koma_ first appeared in SCOPe 2.03
  
• d4koma_ appears in SCOPe 2.05
  
• d4koma_ appears in the current release, SCOPe 2.08