SCOPe 2.03: Domain d4j5ub_: 4j5u B:

Lineage for d4j5ub_ (4j5u B:)

1. Root: SCOPe 2.03

2. Class c: Alpha and beta proteins (a/b) [51349] (147 folds)

3. Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
   main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest

4. Superfamily c.67.1: PLP-dependent transferases [53383] (10 families)

5. Family c.67.1.0: automated matches [191328] (1 protein)
   not a true family

6. Protein automated matches [190151] (66 species)
   not a true protein

7. Species Rickettsia rickettsii [TaxId:392021] [234926] (1 PDB entry)

8. Domain d4j5ub_: 4j5u B: [234927]
   automated match to d3n0lb_

Details for d4j5ub_

PDB Entry: 4j5u, 1.7 Å

PDB Description: X-ray crystal structure of a serine hydroxymethyltransferase with covalently bound PLP from Rickettsia rickettsii str. Sheila Smith

PDB Compounds: (B:) serine hydroxymethyltransferase

SCOPe Domain Sequences for d4j5ub_:

Sequence; same for both SEQRES and ATOM records:

>d4j5ub_ c.67.1.0 (B:) automated matches {Rickettsia rickettsii [TaxId: 392021]}
mnifnnnlhetdkeineiikheklrqssvieliasenfvspavleaqgalltnkyaegyp
skrfyngceevdkaenlaiervkklfnckyanvqphsgsqanqavylallqpgdtvlgms
ldsgghlthgaapnmsgkwfnavsysvnketylidydeierladlhkpklliagfsaypr
nidfakfreivdkvgayfmadiahiaglvatgehqspipyahavtstthktlrgprggli
lsndeeighkinsalfpglqggplmhiiaakavaflenlqpeyksyiqqvisnakalass
lqergydiltggtdnhivlvdlrkdgitgklaansldragitcnknaipfdetspfitsg
irlgtpacttrgfkekdfvlvghmvadildglknnednsaleqqvlnevtklielfpfyg

Timeline for d4j5ub_:

• d4j5ub_ is new in SCOPe 2.03-stable
  
• d4j5ub_ appears in SCOPe 2.04
  
• d4j5ub_ appears in the current release, SCOPe 2.08