SCOPe 2.05: Domain d3zcdb_: 3zcd B:

Lineage for d3zcdb_ (3zcd B:)

1. Root: SCOPe 2.05

2. Class a: All alpha proteins [46456] (286 folds)

3. Fold a.128: Terpenoid synthases [48575] (1 superfamily)
   multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers

4. Superfamily a.128.1: Terpenoid synthases [48576] (6 families)
   duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J

5. Family a.128.1.0: automated matches [196408] (1 protein)
   not a true family

6. Protein automated matches [196409] (30 species)
   not a true protein

7. Species Pseudomonas aeruginosa [TaxId:208964] [229469] (6 PDB entries)

8. Domain d3zcdb_: 3zcd B: [233983]
   automated match to d3zcda_

Details for d3zcdb_

PDB Entry: 3zcd, 1.55 Å

PDB Description: native structure of farnesyl pyrophosphate synthase from pseudomonas aeruginosa pa01.

PDB Compounds: (B:) Geranyltranstransferase

SCOPe Domain Sequences for d3zcdb_:

Sequence, based on SEQRES records:

>d3zcdb_ a.128.1.0 (B:) automated matches {Pseudomonas aeruginosa [TaxId: 208964]}
smiaayqarcqarvdaaldalfvapreelqrlyeamrysvmnggkrvrpllayaacealg
gapqradaaacavelihayslvhddlpamddddlrrgqptthrafdeatailaadglqal
afevladtrrnpqehavclemltrlaraagsagmvggqaidlgsvgvaldqaalevmhrh
ktgalieasvrlgalasgraepaslaaleryaeaiglafqvqddildvesdtatlgktqg
kdqahnkptypallgleaakgyalelrdlalaaldgfppsadplrqlaryiv

Sequence, based on observed residues (ATOM records):

>d3zcdb_ a.128.1.0 (B:) automated matches {Pseudomonas aeruginosa [TaxId: 208964]}
smiaayqarcqarvdaaldalfvapreelqrlyeamrysvmnggkrvrpllayaacealg
gapqradaaacavelihayslvhddlpamddddlrrgqptthrafdeatailaadglqal
afevladtrrnpqehavclemltrlaraagsagmvggqaidlgsvgvaldqaalevmhrh
ktgalieasvrlgalasgraepaslaaleryaeaiglafqvqddildvptypallgleaa
kgyalelrdlalaaldgfppsadplrqlaryiv

Timeline for d3zcdb_:

• d3zcdb_ first appeared in SCOPe 2.03
  
• d3zcdb_ appears in SCOPe 2.04
  
• d3zcdb_ is called d3zcdb1 in SCOPe 2.06
  
• d3zcdb_ appears in the current release, SCOPe 2.08, called d3zcdb1