SCOPe 2.03: Domain d1cn3c_: 1cn3 C:

Lineage for d1cn3c_ (1cn3 C:)

1. Root: SCOPe 2.03

2. Class b: All beta proteins [48724] (174 folds)

3. Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
   sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
   characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies

4. Superfamily b.121.6: Group I dsDNA viruses [88648] (2 families)

5. Family b.121.6.1: Papovaviridae-like VP [88649] (3 proteins)

6. Protein Polyomavirus coat proteins [49657] (2 species)

7. Species Murine polyomavirus, strain small-plaque 16 [TaxId:10634] [49658] (5 PDB entries)

8. Domain d1cn3c_: 1cn3 C: [23348]

Details for d1cn3c_

PDB Entry: 1cn3, 2.2 Å

PDB Description: interaction of polyomavirus internal protein vp2 with major capsid protein vp1 and implications for participation of vp2 in viral entry

PDB Compounds: (C:) coat protein vp1

SCOPe Domain Sequences for d1cn3c_:

Sequence; same for both SEQRES and ATOM records:

>d1cn3c_ b.121.6.1 (C:) Polyomavirus coat proteins {Murine polyomavirus, strain small-plaque 16 [TaxId: 10634]}
mevldlvtgpdsvteieaflnprmgqpptpeslteggqyygwsrginlatsdtedspgnn
tlptwsmaklqlpmlnedltcdtlqmweavsvktevvgsgslldvhgfnkptdtvntkgi
stpvegsqyhvfavggepldlqglvtdartkykeegvvtiktitkkdmvnkdqvlnpisk
akldkdgmypveiwhpdpaknentryfgnytggtttppvlqftntlttvlldengvgplc
kgeglylscvdimgwrvtrnydvhhwrglpryfkitlrkrwvk

Timeline for d1cn3c_:

• d1cn3c_ first appeared (with stable ids) in SCOP 1.55
  
• d1cn3c_ appears in SCOPe 2.02
  
• d1cn3c_ appears in SCOPe 2.04
  
• d1cn3c_ appears in the current release, SCOPe 2.08