Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1510239Class b: All beta proteins [48724] (176 folds)
  3. 1527467Fold b.6: Cupredoxin-like [49502] (2 superfamilies)
    sandwich; 7 strands in 2 sheets, greek-key
    variations: some members have additional 1-2 strands
  4. 1527468Superfamily b.6.1: Cupredoxins [49503] (8 families) (S)
    contains copper-binding site
  5. 1528012Family b.6.1.2: Periplasmic domain of cytochrome c oxidase subunit II [49541] (3 proteins)
  6. 1528120Protein automated matches [233094] (2 species)
    not a true protein

Species:

  1. 1528121Cow (Bos taurus) [TaxId:9913] [255752] (1 PDB entry)
  2. 1528124Rhodobacter sphaeroides [TaxId:272943] [233095] (4 PDB entries)
    1. Domains for 3om3:
      1. 1528131Domain d3om3b2: 3om3 B:130-285 [233098]
        Other proteins in same PDB: d3om3a_, d3om3b1, d3om3c_, d3om3d1
        automated match to d1m56b1
        complexed with ca, cd, cu1, dmu, hea, hth, mg, trd; mutant
      2. 1528132Domain d3om3d2: 3om3 D:130-285 [233096]
        Other proteins in same PDB: d3om3a_, d3om3b1, d3om3c_, d3om3d1
        automated match to d1m56b1
        complexed with ca, cd, cu1, dmu, hea, hth, mg, trd; mutant
    2. Domains for 3oma:
      1. 1528129Domain d3omab2: 3oma B:130-285 [239572]
        Other proteins in same PDB: d3omaa_, d3omab1, d3omac_, d3omad1
        automated match to d3om3d2
        complexed with ca, cd, cu, cu1, dmu, hea, hth, mg, oh, trd; mutant
      2. 1528130Domain d3omad2: 3oma D:130-285 [239574]
        Other proteins in same PDB: d3omaa_, d3omab1, d3omac_, d3omad1
        automated match to d3om3d2
        complexed with ca, cd, cu, cu1, dmu, hea, hth, mg, oh, trd; mutant
    3. Domains for 3omi:
      1. 1528125Domain d3omib2: 3omi B:130-285 [239576]
        Other proteins in same PDB: d3omia_, d3omib1, d3omic_, d3omid1
        automated match to d3om3d2
        complexed with ca, cd, cl, cu, cu1, dmu, fe, hea, hth, mg, oh, trd; mutant
      2. 1528126Domain d3omid2: 3omi D:130-285 [239578]
        Other proteins in same PDB: d3omia_, d3omib1, d3omic_, d3omid1
        automated match to d3om3d2
        complexed with ca, cd, cl, cu, cu1, dmu, fe, hea, hth, mg, oh, trd; mutant
    4. Domains for 3omn:
      1. 1528127Domain d3omnb2: 3omn B:130-285 [239580]
        Other proteins in same PDB: d3omna_, d3omnb1, d3omnc_, d3omnd1
        automated match to d3om3d2
        complexed with ca, cd, cl, cu1, dmu, hea, hth, mg, oh, trd; mutant
      2. 1528128Domain d3omnd2: 3omn D:130-285 [239582]
        Other proteins in same PDB: d3omna_, d3omnb1, d3omnc_, d3omnd1
        automated match to d3om3d2
        complexed with ca, cd, cl, cu1, dmu, hea, hth, mg, oh, trd; mutant

More info for Protein automated matches from b.6.1.2: Periplasmic domain of cytochrome c oxidase subunit II

Timeline for Protein automated matches from b.6.1.2: Periplasmic domain of cytochrome c oxidase subunit II: