Lineage for d3gmqa2 (3gmq A:186-281)

  1. Root: SCOPe 2.03
  2. 1287432Class b: All beta proteins [48724] (174 folds)
  3. 1287433Fold b.1: Immunoglobulin-like beta-sandwich [48725] (28 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 1287434Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 1295808Family b.1.1.0: automated matches [191470] (1 protein)
    not a true family
  6. 1295809Protein automated matches [190740] (23 species)
    not a true protein
  7. 1297218Species Mus musculus [TaxId:10090] [227304] (35 PDB entries)
  8. 1297226Domain d3gmqa2: 3gmq A:186-281 [232305]
    Other proteins in same PDB: d3gmqa1, d3gmqb_
    automated match to d3hujc2
    complexed with edo, nag, plm

Details for d3gmqa2

PDB Entry: 3gmq (more details), 1.8 Å

PDB Description: structure of mouse cd1d expressed in sf9 cells, no ligand added
PDB Compounds: (A:) T-cell surface glycoprotein CD1d1

SCOPe Domain Sequences for d3gmqa2:

Sequence, based on SEQRES records: (download)

>d3gmqa2 b.1.1.0 (A:186-281) automated matches {Mus musculus [TaxId: 10090]}
qekpvawlssvpssahghrqlvchvsgfypkpvwvmwmrgdqeqqgthrgdflpnadetw
ylqatldveageeaglacrvkhsslggqdiilywgs

Sequence, based on observed residues (ATOM records): (download)

>d3gmqa2 b.1.1.0 (A:186-281) automated matches {Mus musculus [TaxId: 10090]}
qekpvawlssrqlvchvsgfypkpvwvmwmrgdqeqqgthrgdflpnadetwylqatldv
eageeaglacrvkhsslggqdiilywgs

SCOPe Domain Coordinates for d3gmqa2:

Click to download the PDB-style file with coordinates for d3gmqa2.
(The format of our PDB-style files is described here.)

Timeline for d3gmqa2:

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Domains from same chain:
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d3gmqa1
View in 3D
Domains from other chains:
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d3gmqb_