Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2409301Fold b.105: Penicillin-binding protein associated domain [69188] (1 superfamily)
    sandwich; 6 strands in 2 sheets
  4. 2409302Superfamily b.105.1: Penicillin-binding protein associated domain [69189] (3 families) (S)
  5. 2409332Family b.105.1.0: automated matches [231757] (1 protein)
    not a true family
  6. 2409333Protein automated matches [231758] (5 species)
    not a true protein

Species:

  1. 2409334Escherichia coli [TaxId:562] [232620] (3 PDB entries)
    1. Domains for 3it9:
      1. 2409343Domain d3it9a2: 3it9 A:259-352 [232621]
        Other proteins in same PDB: d3it9a1, d3it9b1, d3it9c1, d3it9d1
        automated match to d1hd8a1
        complexed with so4, suc
      2. 2409344Domain d3it9b2: 3it9 B:259-352 [232623]
        Other proteins in same PDB: d3it9a1, d3it9b1, d3it9c1, d3it9d1
        automated match to d1hd8a1
        complexed with so4, suc
      3. 2409345Domain d3it9c2: 3it9 C:259-352 [232625]
        Other proteins in same PDB: d3it9a1, d3it9b1, d3it9c1, d3it9d1
        automated match to d1hd8a1
        complexed with so4, suc
      4. 2409346Domain d3it9d2: 3it9 D:259-352 [239360]
        Other proteins in same PDB: d3it9a1, d3it9b1, d3it9c1, d3it9d1
        automated match to d3it9a2
        complexed with so4, suc
    2. Domains for 3ita:
      1. 2409339Domain d3itaa2: 3ita A:259-352 [246951]
        Other proteins in same PDB: d3itaa1, d3itab1, d3itac1, d3itad1
        automated match to d3it9a2
        complexed with aic, aix, so4
      2. 2409340Domain d3itab2: 3ita B:259-352 [246953]
        Other proteins in same PDB: d3itaa1, d3itab1, d3itac1, d3itad1
        automated match to d3it9a2
        complexed with aic, aix, so4
      3. 2409341Domain d3itac2: 3ita C:259-352 [246955]
        Other proteins in same PDB: d3itaa1, d3itab1, d3itac1, d3itad1
        automated match to d3it9a2
        complexed with aic, aix, so4
      4. 2409342Domain d3itad2: 3ita D:259-352 [246957]
        Other proteins in same PDB: d3itaa1, d3itab1, d3itac1, d3itad1
        automated match to d3it9a2
        complexed with aic, aix, so4
    3. Domains for 3itb:
      1. 2409335Domain d3itba2: 3itb A:259-352 [246959]
        Other proteins in same PDB: d3itba1, d3itbb1, d3itbc1, d3itbd1
        automated match to d3it9a2
        complexed with so4, suc
      2. 2409336Domain d3itbb2: 3itb B:259-352 [246961]
        Other proteins in same PDB: d3itba1, d3itbb1, d3itbc1, d3itbd1
        automated match to d3it9a2
        complexed with so4, suc
      3. 2409337Domain d3itbc2: 3itb C:259-352 [246963]
        Other proteins in same PDB: d3itba1, d3itbb1, d3itbc1, d3itbd1
        automated match to d3it9a2
        complexed with so4, suc
      4. 2409338Domain d3itbd2: 3itb D:259-352 [246965]
        Other proteins in same PDB: d3itba1, d3itbb1, d3itbc1, d3itbd1
        automated match to d3it9a2
        complexed with so4, suc
  2. 2409347Escherichia coli [TaxId:83333] [321360] (1 PDB entry)
  3. 2409349Haemophilus influenzae [TaxId:727] [231759] (1 PDB entry)
  4. 3052142Staphylococcus aureus [TaxId:93062] [352204] (3 PDB entries)
    1. Domains for 5tw4:
      1. 3052260Domain d5tw4a2: 5tw4 A:316-383 [352322]
        Other proteins in same PDB: d5tw4a1, d5tw4b1
        automated match to d3huma2
        complexed with ai8, cl, gol, na, zn; mutant
      2. 3052273Domain d5tw4b2: 5tw4 B:316-383 [352335]
        Other proteins in same PDB: d5tw4a1, d5tw4b1
        automated match to d3huma2
    2. Domains for 5tw8:
      1. 3052232Domain d5tw8b2: 5tw8 B:316-383 [352294]
        Other proteins in same PDB: d5tw8a1, d5tw8b1
        automated match to d3huma2
        complexed with ai8, na, zn
      2. 3052243Domain d5tw8a2: 5tw8 A:316-382 [352305]
        Other proteins in same PDB: d5tw8a1, d5tw8b1
        automated match to d3huma2
        complexed with ai8, na, zn
    3. Domains for 5tx9:
      1. 3052143Domain d5tx9a2: 5tx9 A:316-382 [352205]
        Other proteins in same PDB: d5tx9a1, d5tx9b1
        automated match to d3huma2
        complexed with na, rb6, zn; mutant
      2. 3052155Domain d5tx9b2: 5tx9 B:316-383 [352217]
        Other proteins in same PDB: d5tx9a1, d5tx9b1
        automated match to d3huma2
        complexed with na, rb6, zn; mutant
  5. 3052147Staphylococcus aureus [TaxId:1280] [352209] (1 PDB entry)

More info for Protein automated matches from b.105.1.0: automated matches

Timeline for Protein automated matches from b.105.1.0: automated matches: