Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1565955Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1565956Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 1568602Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 1570584Family c.1.8.11: Putative alpha-L-fucosidase, catalytic domain [102079] (2 proteins)
    glycosyl hydrolase family 29; contains additional beta-barrel with a topological similarity to the C-terminal domain of alpha amylases
    automatically mapped to Pfam PF01120
  6. 1570593Protein automated matches [231482] (2 species)
    not a true protein

Species:

  1. 1570594Thermotoga maritima [TaxId:2336] [231744] (10 PDB entries)
    1. Domains for 2zwy:
      1. 1570611Domain d2zwya1: 2zwy A:7-356 [231752]
        Other proteins in same PDB: d2zwya2, d2zwyb2
        automated match to d1hl9a2
      2. 1570612Domain d2zwyb1: 2zwy B:7-356 [231745]
        Other proteins in same PDB: d2zwya2, d2zwyb2
        automated match to d1hl9a2
    2. Domains for 2zwz:
      1. 1570597Domain d2zwza1: 2zwz A:7-356 [231748]
        Other proteins in same PDB: d2zwza2, d2zwzb2
        automated match to d1hl9a2
        complexed with zwz
      2. 1570598Domain d2zwzb1: 2zwz B:7-356 [231750]
        Other proteins in same PDB: d2zwza2, d2zwzb2
        automated match to d1hl9a2
        complexed with zwz
    3. Domains for 2zx5:
      1. 1570613Domain d2zx5a1: 2zx5 A:7-356 [245016]
        Other proteins in same PDB: d2zx5a2, d2zx5b2
        automated match to d2zwyb1
        complexed with zx5
      2. 1570614Domain d2zx5b1: 2zx5 B:7-356 [245018]
        Other proteins in same PDB: d2zx5a2, d2zx5b2
        automated match to d2zwyb1
        complexed with zx5
    4. Domains for 2zx6:
      1. 1570601Domain d2zx6a1: 2zx6 A:7-356 [245020]
        Other proteins in same PDB: d2zx6a2, d2zx6b2
        automated match to d2zwyb1
        complexed with zx6
      2. 1570602Domain d2zx6b1: 2zx6 B:7-356 [245022]
        Other proteins in same PDB: d2zx6a2, d2zx6b2
        automated match to d2zwyb1
        complexed with zx6
    5. Domains for 2zx7:
      1. 1570603Domain d2zx7a1: 2zx7 A:7-356 [245024]
        Other proteins in same PDB: d2zx7a2, d2zx7b2
        automated match to d2zwyb1
        complexed with zx7
      2. 1570604Domain d2zx7b1: 2zx7 B:7-356 [245026]
        Other proteins in same PDB: d2zx7a2, d2zx7b2
        automated match to d2zwyb1
        complexed with zx7
    6. Domains for 2zx8:
      1. 1570599Domain d2zx8a1: 2zx8 A:7-356 [245028]
        Other proteins in same PDB: d2zx8a2, d2zx8b2
        automated match to d2zwyb1
        complexed with zx8
      2. 1570600Domain d2zx8b1: 2zx8 B:7-356 [245030]
        Other proteins in same PDB: d2zx8a2, d2zx8b2
        automated match to d2zwyb1
        complexed with zx8
    7. Domains for 2zx9:
      1. 1570607Domain d2zx9a1: 2zx9 A:7-356 [245032]
        Other proteins in same PDB: d2zx9a2, d2zx9b2
        automated match to d2zwyb1
        complexed with zx9
      2. 1570608Domain d2zx9b1: 2zx9 B:7-356 [245034]
        Other proteins in same PDB: d2zx9a2, d2zx9b2
        automated match to d2zwyb1
        complexed with zx9
    8. Domains for 2zxa:
      1. 1570605Domain d2zxaa1: 2zxa A:7-356 [245036]
        Other proteins in same PDB: d2zxaa2, d2zxab2
        automated match to d2zwyb1
        complexed with zxa
      2. 1570606Domain d2zxab1: 2zxa B:7-356 [245038]
        Other proteins in same PDB: d2zxaa2, d2zxab2
        automated match to d2zwyb1
        complexed with zxa
    9. Domains for 2zxb:
      1. 1570609Domain d2zxba1: 2zxb A:7-356 [245040]
        Other proteins in same PDB: d2zxba2, d2zxbb2
        automated match to d2zwyb1
        complexed with zxb
      2. 1570610Domain d2zxbb1: 2zxb B:7-356 [245042]
        Other proteins in same PDB: d2zxba2, d2zxbb2
        automated match to d2zwyb1
        complexed with zxb
    10. Domains for 2zxd:
      1. 1570595Domain d2zxda1: 2zxd A:7-356 [245044]
        Other proteins in same PDB: d2zxda2, d2zxdb2
        automated match to d2zwyb1
        complexed with zxd
      2. 1570596Domain d2zxdb1: 2zxd B:7-356 [245046]
        Other proteins in same PDB: d2zxda2, d2zxdb2
        automated match to d2zwyb1
        complexed with zxd
  2. 1570615Thermotoga maritima [TaxId:243274] [231483] (1 PDB entry)

More info for Protein automated matches from c.1.8.11: Putative alpha-L-fucosidase, catalytic domain

Timeline for Protein automated matches from c.1.8.11: Putative alpha-L-fucosidase, catalytic domain: