SCOPe 2.08: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.08
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
the first seven superfamilies have similar phosphate-binding sites

Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

Family c.1.8.11: Putative alpha-L-fucosidase, catalytic domain [102079] (2 proteins)
glycosyl hydrolase family 29; contains additional beta-barrel with a topological similarity to the C-terminal domain of alpha amylases
automatically mapped to Pfam PF01120

Protein automated matches [231482] (2 species)
not a true protein

Species:

Thermotoga maritima [TaxId:2336] [231744] (10 PDB entries)
1. Domains for 2zwy:
  1. Domain d2zwya1: 2zwy A:7-356 [231752]
    Other proteins in same PDB: d2zwya2, d2zwya3, d2zwyb2, d2zwyb3
    automated match to d1hl9a2
  2. Domain d2zwyb1: 2zwy B:7-356 [231745]
    Other proteins in same PDB: d2zwya2, d2zwya3, d2zwyb2, d2zwyb3
    automated match to d1hl9a2
2. Domains for 2zwz:
  1. Domain d2zwza1: 2zwz A:7-356 [231748]
    Other proteins in same PDB: d2zwza2, d2zwzb2
    automated match to d1hl9a2
    complexed with zwz
  2. Domain d2zwzb1: 2zwz B:7-356 [231750]
    Other proteins in same PDB: d2zwza2, d2zwzb2
    automated match to d1hl9a2
    complexed with zwz
3. Domains for 2zx5:
  1. Domain d2zx5a1: 2zx5 A:7-356 [245016]
    Other proteins in same PDB: d2zx5a2, d2zx5b2
    automated match to d2zwyb1
    complexed with zx5
  2. Domain d2zx5b1: 2zx5 B:7-356 [245018]
    Other proteins in same PDB: d2zx5a2, d2zx5b2
    automated match to d2zwyb1
    complexed with zx5
4. Domains for 2zx6:
  1. Domain d2zx6a1: 2zx6 A:7-356 [245020]
    Other proteins in same PDB: d2zx6a2, d2zx6a3, d2zx6b2, d2zx6b3
    automated match to d2zwyb1
    complexed with zx6
  2. Domain d2zx6b1: 2zx6 B:7-356 [245022]
    Other proteins in same PDB: d2zx6a2, d2zx6a3, d2zx6b2, d2zx6b3
    automated match to d2zwyb1
    complexed with zx6
5. Domains for 2zx7:
  1. Domain d2zx7a1: 2zx7 A:7-356 [245024]
    Other proteins in same PDB: d2zx7a2, d2zx7a3, d2zx7b2, d2zx7b3
    automated match to d2zwyb1
    complexed with zx7
  2. Domain d2zx7b1: 2zx7 B:7-356 [245026]
    Other proteins in same PDB: d2zx7a2, d2zx7a3, d2zx7b2, d2zx7b3
    automated match to d2zwyb1
    complexed with zx7
6. Domains for 2zx8:
  1. Domain d2zx8a1: 2zx8 A:7-356 [245028]
    Other proteins in same PDB: d2zx8a2, d2zx8b2
    automated match to d2zwyb1
    complexed with zx8
  2. Domain d2zx8b1: 2zx8 B:7-356 [245030]
    Other proteins in same PDB: d2zx8a2, d2zx8b2
    automated match to d2zwyb1
    complexed with zx8
7. Domains for 2zx9:
  1. Domain d2zx9a1: 2zx9 A:7-356 [245032]
    Other proteins in same PDB: d2zx9a2, d2zx9a3, d2zx9b2, d2zx9b3
    automated match to d2zwyb1
    complexed with zx9
  2. Domain d2zx9b1: 2zx9 B:7-356 [245034]
    Other proteins in same PDB: d2zx9a2, d2zx9a3, d2zx9b2, d2zx9b3
    automated match to d2zwyb1
    complexed with zx9
8. Domains for 2zxa:
  1. Domain d2zxaa1: 2zxa A:7-356 [245036]
    Other proteins in same PDB: d2zxaa2, d2zxaa3, d2zxab2, d2zxab3
    automated match to d2zwyb1
    complexed with zxa
  2. Domain d2zxab1: 2zxa B:7-356 [245038]
    Other proteins in same PDB: d2zxaa2, d2zxaa3, d2zxab2, d2zxab3
    automated match to d2zwyb1
    complexed with zxa
9. Domains for 2zxb:
  1. Domain d2zxba1: 2zxb A:7-356 [245040]
    Other proteins in same PDB: d2zxba2, d2zxba3, d2zxbb2, d2zxbb3
    automated match to d2zwyb1
    complexed with zxb
  2. Domain d2zxbb1: 2zxb B:7-356 [245042]
    Other proteins in same PDB: d2zxba2, d2zxba3, d2zxbb2, d2zxbb3
    automated match to d2zwyb1
    complexed with zxb
10. Domains for 2zxd:
  1. Domain d2zxda1: 2zxd A:7-356 [245044]
    Other proteins in same PDB: d2zxda2, d2zxdb2
    automated match to d2zwyb1
    complexed with zxd
  2. Domain d2zxdb1: 2zxd B:7-356 [245046]
    Other proteins in same PDB: d2zxda2, d2zxdb2
    automated match to d2zwyb1
    complexed with zxd
Thermotoga maritima [TaxId:243274] [231483] (1 PDB entry)
- Domains for 2wsp:
  1. Domain d2wspa1: 2wsp A:5-356 [231484]
    Other proteins in same PDB: d2wspa2, d2wspb2
    automated match to d1hl9a2
  2. Domain d2wspb1: 2wsp B:5-356 [231487]
    Other proteins in same PDB: d2wspa2, d2wspb2
    automated match to d1hl9a2

More info for Protein automated matches from c.1.8.11: Putative alpha-L-fucosidase, catalytic domain

Timeline for Protein automated matches from c.1.8.11: Putative alpha-L-fucosidase, catalytic domain:

Protein automated matches from c.1.8.11: Putative alpha-L-fucosidase, catalytic domain first appeared in SCOPe 2.03
Protein automated matches from c.1.8.11: Putative alpha-L-fucosidase, catalytic domain appears in SCOPe 2.07