SCOPe 2.08: Domain d2nova_: 2nov A:

Lineage for d2nova_ (2nov A:)

1. Root: SCOPe 2.08

2. Class e: Multi-domain proteins (alpha and beta) [56572] (74 folds)

3. Fold e.11: Type II DNA topoisomerase C-terminal domain-like [56718] (1 superfamily)
   4 domains: (1) toprim alpha/beta; (2) "winged helix"-like; (3) alpha+beta; (4) all-alpha

4. Superfamily e.11.1: Type II DNA topoisomerase C-terminal domain-like [56719] (2 families)

5. Family e.11.1.0: automated matches [191600] (1 protein)
   not a true family

6. Protein automated matches [191091] (5 species)
   not a true protein

7. Species Pneumococcus (Streptococcus pneumoniae) [TaxId:1313] [225775] (3 PDB entries)

8. Domain d2nova_: 2nov A: [230970]
   automated match to d3k9fa_

Details for d2nova_

PDB Entry: 2nov, 2.67 Å

PDB Description: breakage-reunion domain of s.pneumoniae topo iv: crystal structure of a gram-positive quinolone target

PDB Compounds: (A:) DNA topoisomerase 4 subunit A

SCOPe Domain Sequences for d2nova_:

Sequence, based on SEQRES records:

>d2nova_ e.11.1.0 (A:) automated matches {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]}
alpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdssiydamvrm
sqnwknreilvemhgnngsmdgdppaamrytearlseiagyllqdiekktvpfawnfddt
ekeptvlpaafpnllvngstgisagyatdipphnlaevidaavymidhptakidklmefl
pgpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanl
vkkiddvrvnnkvagiaevrdesdrdglriaielkkdantelvlnylfkytdlqinynfn
mvaidnftprqvgivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildev
ialirasenkadakenlkvsydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiam
laaiigdertmynlmkkelrevkkkfatprlssl

Sequence, based on observed residues (ATOM records):

>d2nova_ e.11.1.0 (A:) automated matches {Pneumococcus (Streptococcus pneumoniae) [TaxId: 1313]}
alpdirdglkpvqrrilysmnkdsntfdksyrksaksvgnimgnfhphgdssiydamvrm
sqnwknreilvemhgnngsmdgdppaamrytearlseiagyllqdiekktvpfawnfddt
ekeptvlpaafpnllvngstgisgyatdipphnlaevidaavymidhptakidklmeflp
gpdfptgaiiqgrdeikkayetgkgrvvvrskteieklkggkeqiviteipyeinkanlv
kkiddvrvnnkvaevrdelriaidantelvlnylfkytdlqinynfnmvaidnftprqvg
ivpilssyiahrrevilarsrfdkekaekrlhiveglirvisildevialirasenkada
kenlkvydfteeqaeaivtlqlyrltntdvvvlqeeeaelrekiamlaaiigdertmynl
mkkelrevkkkfatprlssl

Timeline for d2nova_:

• d2nova_ first appeared in SCOPe 2.03
  
• d2nova_ appears in SCOPe 2.07