SCOPe 2.04: Domain d2j1pa_: 2j1p A:

Lineage for d2j1pa_ (2j1p A:)

1. Root: SCOPe 2.04

2. Class a: All alpha proteins [46456] (285 folds)

3. Fold a.128: Terpenoid synthases [48575] (1 superfamily)
   multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers

4. Superfamily a.128.1: Terpenoid synthases [48576] (6 families)
   duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J

5. Family a.128.1.0: automated matches [196408] (1 protein)
   not a true family

6. Protein automated matches [196409] (27 species)
   not a true protein

7. Species White mustard (Sinapis alba) [TaxId:3728] [230881] (1 PDB entry)

8. Domain d2j1pa_: 2j1p A: [230882]
   automated match to d3oacd_
   complexed with bme, grg, pgo

Details for d2j1pa_

PDB Entry: 2j1p, 1.8 Å

PDB Description: geranylgeranyl diphosphate synthase from sinapis alba in complex with ggpp

PDB Compounds: (A:) Geranylgeranyl pyrophosphate synthetase

SCOPe Domain Sequences for d2j1pa_:

Sequence, based on SEQRES records:

>d2j1pa_ a.128.1.0 (A:) automated matches {White mustard (Sinapis alba) [TaxId: 3728]}
pisyiirkadsvnkaldsavplreplkiheamrysllaggkrvrpvlciaacelvggees
lampaacavemihtmslihddlpcmdnddlrrgkptnhkvygedvavlagdallsfafeh
lasatssevsparvvravgelakaigteglvagqvvdissegldlnnvglehlkfihlhk
taalleasavlggiigggsdeeierlrkfarcigllfqvvddildvtksskltypklmgl
eksrefaeklnteardqllgfdsdkvapllalanyianrqn

Sequence, based on observed residues (ATOM records):

>d2j1pa_ a.128.1.0 (A:) automated matches {White mustard (Sinapis alba) [TaxId: 3728]}
pisyiirkadsvnkaldsavplreplkiheamrysllaggkrvrpvlciaacelvggees
lampaacavemihtmslihddlpcmdnddlrrgkptnhkvygedvavlagdallsfafeh
lasatssevsparvvravgelakaigteglvagqvvdisldlnnvglehlkfihlhktaa
lleasavlggiigggsdeeierlrkfarcigllfqvvddildvtkkltypklmgleksre
faeklnteardqllgfdsdkvapllalanyianrqn

Timeline for d2j1pa_:

• d2j1pa_ first appeared in SCOPe 2.03
  
• d2j1pa_ appears in SCOPe 2.05
  
• d2j1pa_ appears in the current release, SCOPe 2.08