Lineage for d2d5vb1 (2d5v B:1-79)

  1. Root: SCOPe 2.04
  2. 1473060Class a: All alpha proteins [46456] (285 folds)
  3. 1488831Fold a.35: lambda repressor-like DNA-binding domains [47412] (1 superfamily)
    core: 4 helices; folded leaf, closed
  4. 1488832Superfamily a.35.1: lambda repressor-like DNA-binding domains [47413] (14 families) (S)
  5. 1489190Family a.35.1.7: CUT domain [116891] (5 proteins)
    Pfam PF02376
  6. 1489206Protein automated matches [190367] (2 species)
    not a true protein
  7. 1489210Species Norway rat (Rattus norvegicus) [TaxId:10116] [230635] (1 PDB entry)
  8. 1489212Domain d2d5vb1: 2d5v B:1-79 [230639]
    Other proteins in same PDB: d2d5va2, d2d5vb2
    automated match to d1s7ea2
    protein/DNA complex; complexed with act, gol

Details for d2d5vb1

PDB Entry: 2d5v (more details), 2 Å

PDB Description: Crystal structure of HNF-6alpha DNA-binding domain in complex with the TTR promoter
PDB Compounds: (B:) Hepatocyte nuclear factor 6

SCOPe Domain Sequences for d2d5vb1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2d5vb1 a.35.1.7 (B:1-79) automated matches {Norway rat (Rattus norvegicus) [TaxId: 10116]}

SCOPe Domain Coordinates for d2d5vb1:

Click to download the PDB-style file with coordinates for d2d5vb1.
(The format of our PDB-style files is described here.)

Timeline for d2d5vb1:

View in 3D
Domains from same chain:
(mouse over for more information)