Lineage for Species: Human polyomavirus 9 [TaxId: 943908]

  1. Root: SCOPe 2.04
  2. 1510239Class b: All beta proteins [48724] (176 folds)
  3. 1563153Fold b.121: Nucleoplasmin-like/VP (viral coat and capsid proteins) [88632] (7 superfamilies)
    sandwich; 8 strands in 2 sheets; jelly-roll; some members can have additional 1-2 strands
    characteristic interaction between the domains of this fold allows the formation of five-fold and pseudo six-fold assemblies
  4. 1564135Superfamily b.121.6: Group I dsDNA viruses [88648] (2 families) (S)
  5. 1564136Family b.121.6.1: Papovaviridae-like VP [88649] (3 proteins)
  6. 1564176Protein automated matches [191200] (3 species)
    not a true protein
  7. 1564183Species Human polyomavirus 9 [TaxId:943908] [229433] (7 PDB entries)

PDB entries in Species: Human polyomavirus 9 [TaxId: 943908]:

  1. Domain(s) for 4mbx:
    1. 1564204Domain d4mbxa_: 4mbx A: [235563]
      automated match to d4mbxe_
      complexed with ca, edo
    2. 1564205Domain d4mbxb_: 4mbx B: [235564]
      automated match to d4mbxe_
      complexed with ca, edo
    3. 1564206Domain d4mbxc_: 4mbx C: [235565]
      automated match to d4mbxe_
      complexed with ca, edo
    4. 1564207Domain d4mbxd_: 4mbx D: [229434]
      automated match to d1vpsb_
      complexed with ca, edo
    5. 1564208Domain d4mbxe_: 4mbx E: [229435]
      automated match to d1vpsb_
      complexed with ca, edo
    6. 1564209Domain d4mbxf_: 4mbx F: [229436]
      automated match to d1vpsb_
      complexed with ca, edo
    7. 1564210Domain d4mbxg_: 4mbx G: [235566]
      automated match to d4mbxd_
      complexed with ca, edo
    8. 1564211Domain d4mbxh_: 4mbx H: [235568]
      automated match to d4mbxd_
      complexed with ca, edo
    9. 1564212Domain d4mbxi_: 4mbx I: [235569]
      automated match to d4mbxd_
      complexed with ca, edo
    10. 1564213Domain d4mbxj_: 4mbx J: [235571]
      automated match to d4mbxe_
      complexed with ca, edo
  2. Domain(s) for 4mby:
    1. 1564184Domain d4mbya_: 4mby A: [235570]
      automated match to d4mbxe_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    2. 1564185Domain d4mbyb_: 4mby B: [235573]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    3. 1564186Domain d4mbyc_: 4mby C: [235574]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    4. 1564187Domain d4mbyd_: 4mby D: [235572]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    5. 1564188Domain d4mbye_: 4mby E: [235576]
      automated match to d4mbxe_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    6. 1564189Domain d4mbyf_: 4mby F: [235575]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    7. 1564190Domain d4mbyg_: 4mby G: [235577]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    8. 1564191Domain d4mbyh_: 4mby H: [235579]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    9. 1564192Domain d4mbyi_: 4mby I: [235578]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    10. 1564193Domain d4mbyj_: 4mby J: [235580]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
  3. Domain(s) for 4mbz:
    1. 1564194Domain d4mbza_: 4mbz A: [235581]
      automated match to d4mbxe_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    2. 1564195Domain d4mbzb_: 4mbz B: [235582]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    3. 1564196Domain d4mbzc_: 4mbz C: [235583]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    4. 1564197Domain d4mbzd_: 4mbz D: [235584]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    5. 1564198Domain d4mbze_: 4mbz E: [235585]
      automated match to d4mbxe_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    6. 1564199Domain d4mbzf_: 4mbz F: [235587]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    7. 1564200Domain d4mbzg_: 4mbz G: [235586]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    8. 1564201Domain d4mbzh_: 4mbz H: [235588]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    9. 1564202Domain d4mbzi_: 4mbz I: [235590]
      automated match to d4mbxd_
      protein/DNA complex; complexed with ca, cl, edo, ipa
    10. 1564203Domain d4mbzj_: 4mbz J: [235589]
      automated match to d4mbxe_
      protein/DNA complex; complexed with ca, cl, edo, ipa
  4. Domain(s) for 4poq:
    1. 1564224Domain d4poqa_: 4poq A: [254069]
      automated match to d4posb_
      complexed with ca, edo, ipa
    2. 1564225Domain d4poqb_: 4poq B: [254070]
      automated match to d4posb_
      complexed with ca, edo, ipa
    3. 1564226Domain d4poqc_: 4poq C: [254071]
      automated match to d4posb_
      complexed with ca, edo, ipa
    4. 1564227Domain d4poqd_: 4poq D: [254072]
      automated match to d4posb_
      complexed with ca, edo, ipa
    5. 1564228Domain d4poqe_: 4poq E: [254073]
      automated match to d4posb_
      complexed with ca, edo, ipa
    6. 1564229Domain d4poqf_: 4poq F: [254074]
      automated match to d4posb_
      complexed with ca, edo, ipa
    7. 1564230Domain d4poqg_: 4poq G: [254075]
      automated match to d4posb_
      complexed with ca, edo, ipa
    8. 1564231Domain d4poqh_: 4poq H: [254076]
      automated match to d4posb_
      complexed with ca, edo, ipa
    9. 1564232Domain d4poqi_: 4poq I: [254077]
      automated match to d4posb_
      complexed with ca, edo, ipa
    10. 1564233Domain d4poqj_: 4poq J: [254078]
      automated match to d4posb_
      complexed with ca, edo, ipa
  5. Domain(s) for 4por:
    1. 1564234Domain d4pora_: 4por A: [254079]
      automated match to d4posb_
      complexed with ca, edo, ipa
    2. 1564235Domain d4porb_: 4por B: [254080]
      automated match to d4posb_
      complexed with ca, edo, ipa
    3. 1564236Domain d4porc_: 4por C: [254081]
      automated match to d4posb_
      complexed with ca, edo, ipa
    4. 1564237Domain d4pord_: 4por D: [254082]
      automated match to d4posb_
      complexed with ca, edo, ipa
    5. 1564238Domain d4pore_: 4por E: [254083]
      automated match to d4posb_
      complexed with ca, edo, ipa
    6. 1564239Domain d4porf_: 4por F: [254084]
      automated match to d4posb_
      complexed with ca, edo, ipa
    7. 1564240Domain d4porg_: 4por G: [254085]
      automated match to d4posb_
      complexed with ca, edo, ipa
    8. 1564241Domain d4porh_: 4por H: [254086]
      automated match to d4posb_
      complexed with ca, edo, ipa
    9. 1564242Domain d4pori_: 4por I: [254087]
      automated match to d4posb_
      complexed with ca, edo, ipa
    10. 1564243Domain d4porj_: 4por J: [254088]
      automated match to d4posb_
      complexed with ca, edo, ipa
  6. Domain(s) for 4pos:
    1. 1564214Domain d4posa_: 4pos A: [240734]
      automated match to d4posb_
      complexed with ca, edo, ipa
    2. 1564215Domain d4posb_: 4pos B: [238489]
      automated match to d1vpsb_
      complexed with ca, edo, ipa
    3. 1564216Domain d4posc_: 4pos C: [240735]
      automated match to d4posb_
      complexed with ca, edo, ipa
    4. 1564217Domain d4posd_: 4pos D: [240736]
      automated match to d4posb_
      complexed with ca, edo, ipa
    5. 1564218Domain d4pose_: 4pos E: [240737]
      automated match to d4posb_
      complexed with ca, edo, ipa
    6. 1564219Domain d4posf_: 4pos F: [240738]
      automated match to d4posb_
      complexed with ca, edo, ipa
    7. 1564220Domain d4posg_: 4pos G: [240739]
      automated match to d4posb_
      complexed with ca, edo, ipa
    8. 1564221Domain d4posh_: 4pos H: [240740]
      automated match to d4posb_
      complexed with ca, edo, ipa
    9. 1564222Domain d4posi_: 4pos I: [240741]
      automated match to d4posb_
      complexed with ca, edo, ipa
    10. 1564223Domain d4posj_: 4pos J: [240742]
      automated match to d4posb_
      complexed with ca, edo, ipa
  7. Domain(s) for 4pot:
    1. 1564244Domain d4pota_: 4pot A: [254089]
      automated match to d4posb_
      complexed with ca, edo, ipa
    2. 1564245Domain d4potb_: 4pot B: [254090]
      automated match to d4posb_
      complexed with ca, edo, ipa
    3. 1564246Domain d4potc_: 4pot C: [254091]
      automated match to d4posb_
      complexed with ca, edo, ipa
    4. 1564247Domain d4potd_: 4pot D: [254092]
      automated match to d4posb_
      complexed with ca, edo, ipa
    5. 1564248Domain d4pote_: 4pot E: [254093]
      automated match to d4posb_
      complexed with ca, edo, ipa
    6. 1564249Domain d4potf_: 4pot F: [254094]
      automated match to d4posb_
      complexed with ca, edo, ipa
    7. 1564250Domain d4potg_: 4pot G: [254095]
      automated match to d4posb_
      complexed with ca, edo, ipa
    8. 1564251Domain d4poth_: 4pot H: [254096]
      automated match to d4posb_
      complexed with ca, edo, ipa
    9. 1564252Domain d4poti_: 4pot I: [254097]
      automated match to d4posb_
      complexed with ca, edo, ipa
    10. 1564253Domain d4potj_: 4pot J: [254098]
      automated match to d4posb_
      complexed with ca, edo, ipa

More info for Species Human polyomavirus 9 [TaxId:943908] from b.121.6.1 automated matches

Timeline for Species Human polyomavirus 9 [TaxId:943908] from b.121.6.1 automated matches: