Lineage for d4bmya_ (4bmy A:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2887810Fold c.56: Phosphorylase/hydrolase-like [53162] (8 superfamilies)
    core: 3 layers, a/b/a ; mixed sheet of 5 strands: order 21354; strand 4 is antiparallel to the rest; contains crossover loops
  4. 2887827Superfamily c.56.2: Purine and uridine phosphorylases [53167] (2 families) (S)
    complex architecture; contains mixed beta-sheet of 8 strands, order 23415867, strands 3, 6 & 7 are antiparallel to the rest; and barrel, closed; n=5, S=8
  5. 2888846Family c.56.2.0: automated matches [191488] (1 protein)
    not a true family
  6. 2888847Protein automated matches [190781] (46 species)
    not a true protein
  7. 2889092Species Helicobacter pylori [TaxId:85962] [227827] (10 PDB entries)
  8. 2889096Domain d4bmya_: 4bmy A: [227830]
    automated match to d4f2wb_
    complexed with so4; mutant

Details for d4bmya_

PDB Entry: 4bmy (more details), 1.65 Å

PDB Description: Structure of futalosine hydrolase mutant of Helicobacter pylori strain 26695
PDB Compounds: (A:) MTA/SAH nucleosidase

SCOPe Domain Sequences for d4bmya_:

Sequence, based on SEQRES records: (download)

>d4bmya_ c.56.2.0 (A:) automated matches {Helicobacter pylori [TaxId: 85962]}
vqkigilgamreeitpilelfgvdfeeiplggnvfhkgvyhnkeiivayskigkvhstlt
ttsmilafgvqkvlfsgvagslvkdlkindllvaiqlvqhdvdlsafdhplgfipesaif
ietseslnalakevaneqhivlkegviasgdqfvhskerkeflvsefkasavemegasva
fvcqkfgvpccvlrsisanadeeanmsfdafleksaqtsakflksmvdel

Sequence, based on observed residues (ATOM records): (download)

>d4bmya_ c.56.2.0 (A:) automated matches {Helicobacter pylori [TaxId: 85962]}
vqkigilgamreeitpilelfgvdfeeiplggnvfhkgvyhnkeiivayskigkvhstlt
ttsmilafgvqkvlfsgvagslvkdlkindllvaiqlvqhdvdlsafdhplgfipesaif
ietseslnalakevaneqhivlkegviasgdqfvhskerkeflvsefkasavemegasva
fvcqkfgvpccvlrsisanadeedafleksaqtsakflksmvdel

SCOPe Domain Coordinates for d4bmya_:

Click to download the PDB-style file with coordinates for d4bmya_.
(The format of our PDB-style files is described here.)

Timeline for d4bmya_: