Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2172288Fold d.58: Ferredoxin-like [54861] (59 superfamilies)
    alpha+beta sandwich with antiparallel beta-sheet; (beta-alpha-beta)x2
  4. 2177144Superfamily d.58.31: Methyl-coenzyme M reductase subunits [55088] (3 families) (S)
    each of the three different subunits, alpha, beta and gamma, contains this fold decorated with additional secondary structures
  5. 2177239Family d.58.31.0: automated matches [227271] (1 protein)
    not a true family
  6. 2177240Protein automated matches [227074] (4 species)
    not a true protein

Species:

  1. 2177241Methanothermobacter marburgensis [TaxId:145263] [226795] (1 PDB entry)
  2. 2177246Uncultured archaeon [TaxId:115547] [226262] (1 PDB entry)
  3. 2292072Methanotorris formicicus [TaxId:647171] [335373] (2 PDB entries)
    1. Domains for 5n28:
      1. 2292073Domain d5n28f_: 5n28 F: [335374]
        Other proteins in same PDB: d5n28b2, d5n28e2
        automated match to d1e6yc_
        complexed with com, f43, k, tp7
      2. 2292083Domain d5n28c_: 5n28 C: [335384]
        Other proteins in same PDB: d5n28b2, d5n28e2
        automated match to d1e6yc_
        complexed with com, f43, k, tp7
      3. 2292114Domain d5n28e1: 5n28 E:2-188 [335415]
        Other proteins in same PDB: d5n28b2, d5n28e2
        automated match to d1hbnb2
        complexed with com, f43, k, tp7
      4. 2292133Domain d5n28b1: 5n28 B:2-188 [335434]
        Other proteins in same PDB: d5n28b2, d5n28e2
        automated match to d1hbnb2
        complexed with com, f43, k, tp7
    2. Domains for 5n2a:
      1. 2292092Domain d5n2ac_: 5n2a C: [335393]
        Other proteins in same PDB: d5n2ab2
        automated match to d1e6yc_
        complexed with br, com, f43, k, tp7
      2. 2292258Domain d5n2ab1: 5n2a B:2-188 [335559]
        Other proteins in same PDB: d5n2ab2
        automated match to d1hbnb2
        complexed with br, com, f43, k, tp7
  4. 2292100Methanothermococcus thermolithotrophicus [TaxId:523845] [335401] (1 PDB entry)

More info for Protein automated matches from d.58.31.0: automated matches

Timeline for Protein automated matches from d.58.31.0: automated matches: