Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2170735Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2204982Fold d.92: Zincin-like [55485] (2 superfamilies)
    contains mixed beta sheet with connection over free side of the sheet
  4. 2206336Superfamily d.92.2: beta-N-acetylhexosaminidase-like domain [55545] (4 families) (S)
    contains similar fold but lacks its catalytic centre
  5. 2206438Family d.92.2.0: automated matches [227269] (1 protein)
    not a true family
  6. 2206439Protein automated matches [227062] (4 species)
    not a true protein

Species:

  1. 2206440Bacteroides thetaiotaomicron [TaxId:226186] [255267] (4 PDB entries)
    1. Domains for 2jiw:
      1. 2206441Domain d2jiwa3: 2jiw A:4-126 [148103]
        Other proteins in same PDB: d2jiwa1, d2jiwa2, d2jiwb1, d2jiwb2
        automated match to d2vvna3
        complexed with beu
      2. 2206442Domain d2jiwb3: 2jiw B:4-126 [148106]
        Other proteins in same PDB: d2jiwa1, d2jiwa2, d2jiwb1, d2jiwb2
        automated match to d2vvna3
        complexed with beu
    2. Domain for 2vvs:
    3. Domain for 2wzh:
    4. Domain for 4aiu:
  2. 2206446Clostridium perfringens [TaxId:1502] [255689] (1 PDB entry)
  3. 2206449Human (Homo sapiens) [TaxId:9606] [226074] (2 PDB entries)
    1. Domains for 3lmy:
      1. 2206450Domain d3lmya1: 3lmy A:54-199 [212944]
        Other proteins in same PDB: d3lmya2, d3lmyb2
        automated match to d2gjxa2
        complexed with cp6, nag, ndg, so4
      2. 2206451Domain d3lmyb1: 3lmy B:54-199 [212946]
        Other proteins in same PDB: d3lmya2, d3lmyb2
        automated match to d2gjxa2
        complexed with cp6, nag, ndg, so4
    2. Domain for 5bro:
  4. 2206453Streptomyces coelicolor [TaxId:1902] [237537] (3 PDB entries)
    1. Domains for 4c7d:
      1. 2206455Domain d4c7da1: 4c7d A:2-138 [237552]
        Other proteins in same PDB: d4c7da2, d4c7db2
        automated match to d1jaka2
        complexed with edo
      2. 2206456Domain d4c7db1: 4c7d B:1-138 [237550]
        Other proteins in same PDB: d4c7da2, d4c7db2
        automated match to d1jaka2
        complexed with edo
    2. Domains for 4c7f:
      1. 2206457Domain d4c7fa1: 4c7f A:1-138 [237551]
        Other proteins in same PDB: d4c7fa2, d4c7fb2
        automated match to d1jaka2
        complexed with edo, gc2
      2. 2206458Domain d4c7fb1: 4c7f B:2-138 [237549]
        Other proteins in same PDB: d4c7fa2, d4c7fb2
        automated match to d1jaka2
        complexed with edo, gc2
    3. Domain for 4c7g:

More info for Protein automated matches from d.92.2.0: automated matches

Timeline for Protein automated matches from d.92.2.0: automated matches: