Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1886641Class d: Alpha and beta proteins (a+b) [53931] (381 folds)
  3. 1917420Fold d.92: Zincin-like [55485] (2 superfamilies)
    contains mixed beta sheet with connection over free side of the sheet
  4. 1918601Superfamily d.92.2: beta-N-acetylhexosaminidase-like domain [55545] (4 families) (S)
    contains similar fold but lacks its catalytic centre
  5. 1918701Family d.92.2.0: automated matches [227269] (1 protein)
    not a true family
  6. 1918702Protein automated matches [227062] (4 species)
    not a true protein

Species:

  1. 1918703Bacteroides thetaiotaomicron [TaxId:226186] [255267] (4 PDB entries)
    1. Domains for 2jiw:
      1. 1918704Domain d2jiwa3: 2jiw A:4-126 [148103]
        Other proteins in same PDB: d2jiwa1, d2jiwa2, d2jiwb1, d2jiwb2
        automated match to d2vvna3
        complexed with beu
      2. 1918705Domain d2jiwb3: 2jiw B:4-126 [148106]
        Other proteins in same PDB: d2jiwa1, d2jiwa2, d2jiwb1, d2jiwb2
        automated match to d2vvna3
        complexed with beu
    2. Domain for 2vvs:
    3. Domain for 2wzh:
    4. Domain for 4aiu:
  2. 1918709Clostridium perfringens [TaxId:1502] [255689] (1 PDB entry)
  3. 1918712Human (Homo sapiens) [TaxId:9606] [226074] (1 PDB entry)
  4. 1918715Streptomyces coelicolor [TaxId:1902] [237537] (3 PDB entries)
    1. Domains for 4c7d:
      1. 1918717Domain d4c7da1: 4c7d A:2-138 [237552]
        Other proteins in same PDB: d4c7da2, d4c7db2
        automated match to d1jaka2
        complexed with edo
      2. 1918718Domain d4c7db1: 4c7d B:1-138 [237550]
        Other proteins in same PDB: d4c7da2, d4c7db2
        automated match to d1jaka2
        complexed with edo
    2. Domains for 4c7f:
      1. 1918719Domain d4c7fa1: 4c7f A:1-138 [237551]
        Other proteins in same PDB: d4c7fa2, d4c7fb2
        automated match to d1jaka2
        complexed with edo, gc2
      2. 1918720Domain d4c7fb1: 4c7f B:2-138 [237549]
        Other proteins in same PDB: d4c7fa2, d4c7fb2
        automated match to d1jaka2
        complexed with edo, gc2
    3. Domain for 4c7g:

More info for Protein automated matches from d.92.2.0: automated matches

Timeline for Protein automated matches from d.92.2.0: automated matches: