Lineage for Protein: automated matches

  1. Root: SCOPe 2.03
  2. 1287432Class b: All beta proteins [48724] (174 folds)
  3. 1305718Fold b.19: Viral protein domain [49817] (1 superfamily)
    sandwich; 9 strands in 2 sheets; jelly-roll; form trimers
  4. 1305719Superfamily b.19.1: Viral protein domain [49818] (4 families) (S)
    forms homotrimers
  5. 1306141Family b.19.1.0: automated matches [227246] (1 protein)
    not a true family
  6. 1306142Protein automated matches [227017] (8 species)
    not a true protein

Species:

  1. 1306143Influenza a (virus a/turkey/italy/214845/2002 (h7n3)) [TaxId:265120] [226708] (1 PDB entry)
  2. 1306145Influenza a virus (a/singapore/1/1957(h2n2)) [TaxId:382781] [225764] (1 PDB entry)
  3. 1306149Influenza a virus [TaxId:11320] [228462] (6 PDB entries)
    1. Domains for 4k3x:
      1. 1306150Domain d4k3xa_: 4k3x A: [235093]
        automated match to d4k3xe_
        complexed with nag, p4g
      2. 1306151Domain d4k3xc_: 4k3x C: [235094]
        automated match to d4k3xe_
        complexed with nag, p4g
      3. 1306152Domain d4k3xe_: 4k3x E: [228463]
        automated match to d1rvxa_
        complexed with nag, p4g
    2. Domains for 4lkg:
      1. 1306158Domain d4lkga_: 4lkg A: [235395]
        automated match to d4lkge_
        complexed with nag
      2. 1306159Domain d4lkgc_: 4lkg C: [235394]
        automated match to d4lkge_
        complexed with nag
      3. 1306160Domain d4lkge_: 4lkg E: [228796]
        automated match to d1rvxa_
        complexed with nag
    3. Domain for 4lki:
    4. Domain for 4lkj:
    5. Domain for 4lkk:
    6. Domains for 4mc5:
      1. 1306153Domain d4mc5a1: 4mc5 A:4-325 [228537]
        automated match to d1ha0a1
        complexed with fuc, nag
      2. 1306154Domain d4mc5b1: 4mc5 B:4-325 [235595]
        automated match to d1ha0a1
        complexed with fuc, nag
  4. 1306161Influenza a virus [TaxId:1332244] [228093] (9 PDB entries)
    1. Domains for 4ln3:
      1. 1306172Domain d4ln3a_: 4ln3 A: [235421]
        automated match to d4ln3e_
        complexed with nag
      2. 1306173Domain d4ln3c_: 4ln3 C: [235420]
        automated match to d4ln3e_
        complexed with nag
      3. 1306174Domain d4ln3e_: 4ln3 E: [228094]
        automated match to d1rvxa_
        complexed with nag
      4. 1306175Domain d4ln3g_: 4ln3 G: [235422]
        automated match to d4ln3e_
        complexed with nag
      5. 1306176Domain d4ln3i_: 4ln3 I: [235424]
        automated match to d4ln3e_
        complexed with nag
      6. 1306177Domain d4ln3k_: 4ln3 K: [235423]
        automated match to d4ln3e_
        complexed with nag
    2. Domains for 4ln8:
      1. 1306164Domain d4ln8a_: 4ln8 A: [235428]
        automated match to d4ln8e_
        complexed with ca, nag
      2. 1306165Domain d4ln8c_: 4ln8 C: [235429]
        automated match to d4ln8e_
        complexed with ca, nag
      3. 1306166Domain d4ln8e_: 4ln8 E: [228097]
        automated match to d1rvxa_
        complexed with ca, nag
      4. 1306167Domain d4ln8g_: 4ln8 G: [235431]
        automated match to d4ln8e_
        complexed with ca, nag
      5. 1306168Domain d4ln8i_: 4ln8 I: [235432]
        automated match to d4ln8e_
        complexed with ca, nag
      6. 1306169Domain d4ln8k_: 4ln8 K: [235430]
        automated match to d4ln8e_
        complexed with ca, nag
    3. Domains for 4n5j:
      1. 1306180Domain d4n5ja_: 4n5j A: [229926]
        automated match to d4bsea_
        complexed with nag
      2. 1306181Domain d4n5jc_: 4n5j C: [229929]
        automated match to d4bsea_
        complexed with nag
    4. Domains for 4n5k:
      1. 1306184Domain d4n5ka_: 4n5k A: [229928]
        automated match to d4bsea_
        complexed with nag, sia
      2. 1306185Domain d4n5kc_: 4n5k C: [229927]
        automated match to d4bsea_
        complexed with nag, sia
    5. Domains for 4n60:
      1. 1306186Domain d4n60a_: 4n60 A: [229938]
        automated match to d4bsea_
        complexed with nag
      2. 1306187Domain d4n60c_: 4n60 C: [229939]
        automated match to d4bsea_
        complexed with nag
    6. Domains for 4n61:
      1. 1306170Domain d4n61a_: 4n61 A: [229934]
        automated match to d4bsea_
        complexed with nag, sia
      2. 1306171Domain d4n61c_: 4n61 C: [229935]
        automated match to d4bsea_
        complexed with nag, sia
    7. Domains for 4n62:
      1. 1306162Domain d4n62a_: 4n62 A: [229932]
        automated match to d4bsea_
        complexed with nag
      2. 1306163Domain d4n62c_: 4n62 C: [229933]
        automated match to d4bsea_
        complexed with nag
    8. Domains for 4n63:
      1. 1306178Domain d4n63a_: 4n63 A: [229930]
        automated match to d4bsea_
        complexed with nag
      2. 1306179Domain d4n63c_: 4n63 C: [229931]
        automated match to d4bsea_
        complexed with nag
    9. Domains for 4n64:
      1. 1306182Domain d4n64a_: 4n64 A: [229936]
        automated match to d4bsea_
        complexed with nag
      2. 1306183Domain d4n64c_: 4n64 C: [229937]
        automated match to d4bsea_
        complexed with nag
  5. 1306188Influenza virus (a/turkey/italy/214845/2002 (h7n3)) [TaxId:265120] [226710] (1 PDB entry)
  6. 1306190Influenza virus (a/turkey/italy/214845/2002(h7n3)) [TaxId:265120] [226709] (1 PDB entry)
  7. 1306192Influenza virus a/anhui/1/2013 (h7n9) [TaxId:11320] [226707] (6 PDB entries)
    1. Domain for 4bsa:
    2. Domain for 4bsb:
    3. Domain for 4bsc:
    4. Domain for 4bsd:
    5. Domain for 4bse:
    6. Domain for 4bsf:
  8. 1306199Unidentified influenza virus [TaxId:11309] [225763] (4 PDB entries)
    1. Domains for 2wr0:
      1. 1306203Domain d2wr0a1: 2wr0 A:5-325 [206968]
        automated match to d1ha0a1
        complexed with nag
      2. 1306204Domain d2wr0b1: 2wr0 B:5-326 [206969]
        automated match to d1ha0a1
        complexed with nag
      3. 1306205Domain d2wr0c1: 2wr0 C:6-324 [206970]
        automated match to d1ha0a1
        complexed with nag
    2. Domains for 2wr1:
      1. 1306200Domain d2wr1a1: 2wr1 A:5-325 [206971]
        automated match to d1ha0a1
        complexed with nag
      2. 1306201Domain d2wr1b1: 2wr1 B:5-326 [206972]
        automated match to d1ha0a1
        complexed with nag
      3. 1306202Domain d2wr1c1: 2wr1 C:6-324 [206973]
        automated match to d1ha0a1
        complexed with nag
    3. Domains for 2wr5:
      1. 1306206Domain d2wr5a1: 2wr5 A:6-324 [206974]
        automated match to d1ha0a1
      2. 1306207Domain d2wr5b1: 2wr5 B:6-324 [206975]
        automated match to d1ha0a1
      3. 1306208Domain d2wr5c1: 2wr5 C:6-324 [206976]
        automated match to d1ha0a1
    4. Domains for 2wrc:
      1. 1306209Domain d2wrca1: 2wrc A:9-324 [206980]
        automated match to d1ha0a1
      2. 1306210Domain d2wrcb1: 2wrc B:5-324 [206981]
        automated match to d1ha0a1
      3. 1306211Domain d2wrcc1: 2wrc C:7-324 [206982]
        automated match to d1ha0a1

More info for Protein automated matches from b.19.1.0: automated matches

Timeline for Protein automated matches from b.19.1.0: automated matches: