Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1662613Fold d.96: T-fold [55619] (2 superfamilies)
    beta(2)-alpha(2)-beta(2); 2 layers: alpha/beta; antiparallel sheet 1234
    tunnel-shaped: its known members form wide oligomeric barrels different sizes
  4. 1662614Superfamily d.96.1: Tetrahydrobiopterin biosynthesis enzymes-like [55620] (5 families) (S)
    bind purine or pterin in topologically similar sites between subunits
  5. 1663141Family d.96.1.0: automated matches [227243] (1 protein)
    not a true family
  6. 1663142Protein automated matches [227009] (6 species)
    not a true protein

Species:

  1. 1663143Aspergillus flavus [TaxId:5059] [226800] (5 PDB entries)
    1. Domains for 2pes:
      1. 1663150Domain d2pesa1: 2pes A:1-136 [149445]
        automated match to d2yzca1
        complexed with aza, lu, pdc
      2. 1663151Domain d2pesa2: 2pes A:137-295 [149446]
        automated match to d2yzca2
        complexed with aza, lu, pdc
    2. Domains for 3l8w:
      1. 1663144Domain d3l8wa1: 3l8w A:1-136 [212758]
        automated match to d2yzca1
        complexed with 4po, na, xan
      2. 1663145Domain d3l8wa2: 3l8w A:137-295 [212759]
        automated match to d2yzca2
        complexed with 4po, na, xan
    3. Domains for 3l9g:
      1. 1663152Domain d3l9ga1: 3l9g A:1-136 [212762]
        automated match to d2yzca1
        complexed with cl, mrd, na, urc
      2. 1663153Domain d3l9ga2: 3l9g A:137-295 [212763]
        automated match to d2yzca2
        complexed with cl, mrd, na, urc
    4. Domains for 3lbg:
      1. 1663148Domain d3lbga1: 3lbg A:1-136 [212784]
        automated match to d2yzca1
        complexed with 8tx, edo, na, trs
      2. 1663149Domain d3lbga2: 3lbg A:137-295 [212785]
        automated match to d2yzca2
        complexed with 8tx, edo, na, trs
    5. Domains for 3ld4:
      1. 1663146Domain d3ld4a1: 3ld4 A:1-136 [212828]
        automated match to d2yzca1
        complexed with 8nx, edo, na
      2. 1663147Domain d3ld4a2: 3ld4 A:137-295 [212829]
        automated match to d2yzca2
        complexed with 8nx, edo, na
  2. 1663154Escherichia coli [TaxId:469008] [230194] (5 PDB entries)
    1. Domains for 3qn0:
      1. 1663159Domain d3qn0a_: 3qn0 A: [230195]
        automated match to d3i2ba_
        complexed with zn
      2. 1663160Domain d3qn0b_: 3qn0 B: [233337]
        automated match to d3qn0a_
        complexed with zn
      3. 1663161Domain d3qn0c_: 3qn0 C: [233338]
        automated match to d3qn0a_
        complexed with zn
      4. 1663162Domain d3qn0d_: 3qn0 D: [233339]
        automated match to d3qn0a_
        complexed with zn
      5. 1663163Domain d3qn0e_: 3qn0 E: [233340]
        automated match to d3qn0a_
        complexed with zn
      6. 1663164Domain d3qn0f_: 3qn0 F: [233341]
        automated match to d3qn0a_
        complexed with zn
    2. Domains for 3qn9:
      1. 1663165Domain d3qn9a_: 3qn9 A: [233342]
        automated match to d3qn0a_
        complexed with zn
      2. 1663166Domain d3qn9b_: 3qn9 B: [233343]
        automated match to d3qn0a_
        complexed with zn
    3. Domain for 3qna:
    4. Domain for 4ntk:
    5. Domains for 4ntn:
      1. 1663156Domain d4ntna_: 4ntn A: [257999]
        automated match to d3qn9a_
        complexed with fmt, zn
      2. 1663157Domain d4ntnd_: 4ntn D: [259410]
        automated match to d3qn9a_
        complexed with fmt, zn
  3. 1663167Escherichia coli [TaxId:83333] [257997] (1 PDB entry)
  4. 1663169Human (Homo sapiens) [TaxId:9606] [225725] (1 PDB entry)
  5. 1663182Pseudomonas aeruginosa [TaxId:287] [230992] (2 PDB entries)
    1. Domains for 2oba:
      1. 1663183Domain d2obaa_: 2oba A: [230994]
        automated match to d3i2ba_
        complexed with zn
      2. 1663184Domain d2obab_: 2oba B: [230995]
        automated match to d3i2ba_
        complexed with zn
      3. 1663185Domain d2obac_: 2oba C: [230993]
        automated match to d3i2ba_
        complexed with zn
      4. 1663186Domain d2obad_: 2oba D: [230996]
        automated match to d3i2ba_
        complexed with zn
      5. 1663187Domain d2obae_: 2oba E: [230997]
        automated match to d3i2ba_
        complexed with zn
      6. 1663188Domain d2obaf_: 2oba F: [230998]
        automated match to d3i2ba_
        complexed with zn
    2. Domain for 4aey:
  6. 1663190Pyrococcus horikoshii [TaxId:70601] [255116] (2 PDB entries)
    1. Domains for 2dj6:
      1. 1663191Domain d2dj6a_: 2dj6 A: [241575]
        automated match to d2obaa_
      2. 1663192Domain d2dj6b_: 2dj6 B: [241576]
        automated match to d2obaa_
      3. 1663193Domain d2dj6c_: 2dj6 C: [241577]
        automated match to d2obaa_
    2. Domains for 2dtt:
      1. 1663194Domain d2dtta_: 2dtt A: [241646]
        automated match to d2obaa_
        complexed with h4b
      2. 1663195Domain d2dttb_: 2dtt B: [241647]
        automated match to d2obaa_
        complexed with h4b
      3. 1663196Domain d2dttc_: 2dtt C: [241648]
        automated match to d2obaa_
        complexed with h4b
      4. 1663197Domain d2dttd_: 2dtt D: [241649]
        automated match to d2obaa_
        complexed with h4b
      5. 1663198Domain d2dtte_: 2dtt E: [241650]
        automated match to d2obaa_
        complexed with h4b
      6. 1663199Domain d2dttf_: 2dtt F: [241651]
        automated match to d2obaa_
        complexed with h4b

More info for Protein automated matches from d.96.1.0: automated matches

Timeline for Protein automated matches from d.96.1.0: automated matches: