Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2466799Fold c.58: Aminoacid dehydrogenase-like, N-terminal domain [53222] (1 superfamily)
    core: 3 layers: a/b/a; parallel beta-sheet of 4 strands; 2134
  4. 2466800Superfamily c.58.1: Aminoacid dehydrogenase-like, N-terminal domain [53223] (6 families) (S)
  5. 2466801Family c.58.1.1: Aminoacid dehydrogenases [53224] (4 proteins)
    dimerisation domain; contains additional structures including two extra N-terminal strands in the beta-sheet
  6. 2466939Protein automated matches [227004] (3 species)
    not a true protein

Species:

  1. 2466940Clostridium symbiosum [TaxId:1512] [231613] (1 PDB entry)
  2. 2466947Cow (Bos taurus) [TaxId:9913] [225673] (5 PDB entries)
    1. Domains for 3etd:
      1. 2466948Domain d3etda1: 3etd A:1-208 [209639]
        Other proteins in same PDB: d3etda2, d3etdb2, d3etdc2, d3etdd2, d3etde2, d3etdf2
        automated match to d1l1fa2
        complexed with b1t, glu, gtp, ndp
      2. 2466949Domain d3etdb1: 3etd B:1-208 [209641]
        Other proteins in same PDB: d3etda2, d3etdb2, d3etdc2, d3etdd2, d3etde2, d3etdf2
        automated match to d1l1fa2
        complexed with b1t, glu, gtp, ndp
      3. 2466950Domain d3etdc1: 3etd C:1-208 [209643]
        Other proteins in same PDB: d3etda2, d3etdb2, d3etdc2, d3etdd2, d3etde2, d3etdf2
        automated match to d1l1fa2
        complexed with b1t, glu, gtp, ndp
      4. 2466951Domain d3etdd1: 3etd D:1-208 [209645]
        Other proteins in same PDB: d3etda2, d3etdb2, d3etdc2, d3etdd2, d3etde2, d3etdf2
        automated match to d1l1fa2
        complexed with b1t, glu, gtp, ndp
      5. 2466952Domain d3etde1: 3etd E:1-208 [209647]
        Other proteins in same PDB: d3etda2, d3etdb2, d3etdc2, d3etdd2, d3etde2, d3etdf2
        automated match to d1l1fa2
        complexed with b1t, glu, gtp, ndp
      6. 2466953Domain d3etdf1: 3etd F:1-208 [209649]
        Other proteins in same PDB: d3etda2, d3etdb2, d3etdc2, d3etdd2, d3etde2, d3etdf2
        automated match to d1l1fa2
        complexed with b1t, glu, gtp, ndp
    2. Domains for 3ete:
      1. 2466960Domain d3etea1: 3ete A:4-208 [245906]
        Other proteins in same PDB: d3etea2, d3eteb2, d3etec2, d3eted2, d3etee2, d3etef2
        automated match to d3etda1
        complexed with glu, gtp, h3p, ndp
      2. 2466961Domain d3eteb1: 3ete B:4-208 [245908]
        Other proteins in same PDB: d3etea2, d3eteb2, d3etec2, d3eted2, d3etee2, d3etef2
        automated match to d3etda1
        complexed with glu, gtp, h3p, ndp
      3. 2466962Domain d3etec1: 3ete C:4-208 [245910]
        Other proteins in same PDB: d3etea2, d3eteb2, d3etec2, d3eted2, d3etee2, d3etef2
        automated match to d3etda1
        complexed with glu, gtp, h3p, ndp
      4. 2466963Domain d3eted1: 3ete D:4-208 [245912]
        Other proteins in same PDB: d3etea2, d3eteb2, d3etec2, d3eted2, d3etee2, d3etef2
        automated match to d3etda1
        complexed with glu, gtp, h3p, ndp
      5. 2466964Domain d3etee1: 3ete E:4-208 [245914]
        Other proteins in same PDB: d3etea2, d3eteb2, d3etec2, d3eted2, d3etee2, d3etef2
        automated match to d3etda1
        complexed with glu, gtp, h3p, ndp
      6. 2466965Domain d3etef1: 3ete F:4-208 [245916]
        Other proteins in same PDB: d3etea2, d3eteb2, d3etec2, d3eted2, d3etee2, d3etef2
        automated match to d3etda1
        complexed with glu, gtp, h3p, ndp
    3. Domains for 3etg:
      1. 2466954Domain d3etga1: 3etg A:1-208 [209651]
        Other proteins in same PDB: d3etga2, d3etgb2, d3etgc2, d3etgd2, d3etge2, d3etgf2
        automated match to d1l1fa2
        complexed with glu, gtp, gwd, ndp
      2. 2466955Domain d3etgb1: 3etg B:1-208 [209653]
        Other proteins in same PDB: d3etga2, d3etgb2, d3etgc2, d3etgd2, d3etge2, d3etgf2
        automated match to d1l1fa2
        complexed with glu, gtp, gwd, ndp
      3. 2466956Domain d3etgc1: 3etg C:1-208 [209655]
        Other proteins in same PDB: d3etga2, d3etgb2, d3etgc2, d3etgd2, d3etge2, d3etgf2
        automated match to d1l1fa2
        complexed with glu, gtp, gwd, ndp
      4. 2466957Domain d3etgd1: 3etg D:1-208 [209657]
        Other proteins in same PDB: d3etga2, d3etgb2, d3etgc2, d3etgd2, d3etge2, d3etgf2
        automated match to d1l1fa2
        complexed with glu, gtp, gwd, ndp
      5. 2466958Domain d3etge1: 3etg E:1-208 [209659]
        Other proteins in same PDB: d3etga2, d3etgb2, d3etgc2, d3etgd2, d3etge2, d3etgf2
        automated match to d1l1fa2
        complexed with glu, gtp, gwd, ndp
      6. 2466959Domain d3etgf1: 3etg F:1-208 [209661]
        Other proteins in same PDB: d3etga2, d3etgb2, d3etgc2, d3etgd2, d3etge2, d3etgf2
        automated match to d1l1fa2
        complexed with glu, gtp, gwd, ndp
    4. Domains for 6dhd:
      1. 3055054Domain d6dhdb1: 6dhd B:1-208 [355116]
        Other proteins in same PDB: d6dhda2, d6dhdb2, d6dhdc2, d6dhdd2, d6dhde2, d6dhdf2
        automated match to d3etda1
        complexed with glu, gtp, nai
      2. 3055058Domain d6dhdf1: 6dhd F:1-208 [355120]
        Other proteins in same PDB: d6dhda2, d6dhdb2, d6dhdc2, d6dhdd2, d6dhde2, d6dhdf2
        automated match to d3etda1
        complexed with glu, gtp, nai
      3. 3055177Domain d6dhde1: 6dhd E:1-208 [355239]
        Other proteins in same PDB: d6dhda2, d6dhdb2, d6dhdc2, d6dhdd2, d6dhde2, d6dhdf2
        automated match to d3etda1
      4. 3055188Domain d6dhdd1: 6dhd D:1-208 [355250]
        Other proteins in same PDB: d6dhda2, d6dhdb2, d6dhdc2, d6dhdd2, d6dhde2, d6dhdf2
        automated match to d3etda1
        complexed with glu, gtp, nai
      5. 3055199Domain d6dhdc1: 6dhd C:1-208 [355261]
        Other proteins in same PDB: d6dhda2, d6dhdb2, d6dhdc2, d6dhdd2, d6dhde2, d6dhdf2
        automated match to d3etda1
        complexed with glu, gtp, nai
      6. 3055215Domain d6dhda1: 6dhd A:1-208 [355277]
        Other proteins in same PDB: d6dhda2, d6dhdb2, d6dhdc2, d6dhdd2, d6dhde2, d6dhdf2
        automated match to d3etda1
        complexed with glu, gtp, nai
    5. Domains for 6dhq:
      1. 3055061Domain d6dhqb1: 6dhq B:1-208 [355123]
        Other proteins in same PDB: d6dhqa2, d6dhqb2, d6dhqc2, d6dhqd2, d6dhqe2, d6dhqf2
        automated match to d3etda1
        complexed with glu, gtp, ndp
      2. 3055065Domain d6dhqd1: 6dhq D:1-208 [355127]
        Other proteins in same PDB: d6dhqa2, d6dhqb2, d6dhqc2, d6dhqd2, d6dhqe2, d6dhqf2
        automated match to d3etda1
        complexed with glu, gtp, ndp
      3. 3055067Domain d6dhqa1: 6dhq A:1-208 [355129]
        Other proteins in same PDB: d6dhqa2, d6dhqb2, d6dhqc2, d6dhqd2, d6dhqe2, d6dhqf2
        automated match to d3etda1
        complexed with glu, gtp, ndp
      4. 3055093Domain d6dhqf1: 6dhq F:1-208 [355155]
        Other proteins in same PDB: d6dhqa2, d6dhqb2, d6dhqc2, d6dhqd2, d6dhqe2, d6dhqf2
        automated match to d3etda1
        complexed with glu, gtp, ndp
      5. 3055186Domain d6dhqc1: 6dhq C:1-208 [355248]
        Other proteins in same PDB: d6dhqa2, d6dhqb2, d6dhqc2, d6dhqd2, d6dhqe2, d6dhqf2
        automated match to d3etda1
        complexed with glu, gtp, ndp
      6. 3055190Domain d6dhqe1: 6dhq E:1-208 [355252]
        Other proteins in same PDB: d6dhqa2, d6dhqb2, d6dhqc2, d6dhqd2, d6dhqe2, d6dhqf2
        automated match to d3etda1
        complexed with glu, gtp, ndp
  3. 3053593Homo sapiens [TaxId:9606] [353655] (2 PDB entries)
    1. Domains for 6dqg:
      1. 3053594Domain d6dqge1: 6dqg E:10-212 [353656]
        Other proteins in same PDB: d6dqga2, d6dqgb2, d6dqgc2, d6dqgd2, d6dqge2, d6dqgf2
        automated match to d1l1fa2
        complexed with po4; mutant
      2. 3053595Domain d6dqgf1: 6dqg F:10-212 [353657]
        Other proteins in same PDB: d6dqga2, d6dqgb2, d6dqgc2, d6dqgd2, d6dqge2, d6dqgf2
        automated match to d1l1fa2
        complexed with po4; mutant
      3. 3053596Domain d6dqgd1: 6dqg D:10-212 [353658]
        Other proteins in same PDB: d6dqga2, d6dqgb2, d6dqgc2, d6dqgd2, d6dqge2, d6dqgf2
        automated match to d1l1fa2
        complexed with po4; mutant
      4. 3053603Domain d6dqgc1: 6dqg C:10-212 [353665]
        Other proteins in same PDB: d6dqga2, d6dqgb2, d6dqgc2, d6dqgd2, d6dqge2, d6dqgf2
        automated match to d1l1fa2
        complexed with po4; mutant
      5. 3053770Domain d6dqga1: 6dqg A:10-212 [353832]
        Other proteins in same PDB: d6dqga2, d6dqgb2, d6dqgc2, d6dqgd2, d6dqge2, d6dqgf2
        automated match to d1l1fa2
        complexed with po4; mutant
      6. 3053772Domain d6dqgb1: 6dqg B:10-212 [353834]
        Other proteins in same PDB: d6dqga2, d6dqgb2, d6dqgc2, d6dqgd2, d6dqge2, d6dqgf2
        automated match to d1l1fa2
        complexed with po4; mutant
    2. Domains for 6g2u:
      1. 3067304Domain d6g2ud1: 6g2u D:8-212 [367366]
        Other proteins in same PDB: d6g2ua2, d6g2ub2, d6g2uc2, d6g2ud2, d6g2ue2, d6g2uf2
        automated match to d3etda1
        complexed with cl, na, po4
      2. 3067313Domain d6g2uc1: 6g2u C:11-212 [367375]
        Other proteins in same PDB: d6g2ua2, d6g2ub2, d6g2uc2, d6g2ud2, d6g2ue2, d6g2uf2
        automated match to d3etda1
        complexed with cl, na, po4
      3. 3067329Domain d6g2uf1: 6g2u F:8-212 [367391]
        Other proteins in same PDB: d6g2ua2, d6g2ub2, d6g2uc2, d6g2ud2, d6g2ue2, d6g2uf2
        automated match to d3etda1
        complexed with cl, na, po4
      4. 3067360Domain d6g2ua1: 6g2u A:8-212 [367422]
        Other proteins in same PDB: d6g2ua2, d6g2ub2, d6g2uc2, d6g2ud2, d6g2ue2, d6g2uf2
        automated match to d3etda1
        complexed with cl, na, po4
      5. 3067370Domain d6g2ue1: 6g2u E:10-212 [367432]
        Other proteins in same PDB: d6g2ua2, d6g2ub2, d6g2uc2, d6g2ud2, d6g2ue2, d6g2uf2
        automated match to d3etda1
        complexed with cl, na, po4
      6. 3067469Domain d6g2ub1: 6g2u B:11-212 [367531]
        Other proteins in same PDB: d6g2ua2, d6g2ub2, d6g2uc2, d6g2ud2, d6g2ue2, d6g2uf2
        automated match to d3etda1
        complexed with cl, na, po4

More info for Protein automated matches from c.58.1.1: Aminoacid dehydrogenases

Timeline for Protein automated matches from c.58.1.1: Aminoacid dehydrogenases: