Class d: Alpha and beta proteins (a+b) [53931] (381 folds) |
Fold d.175: Penicillin binding protein dimerisation domain [56518] (1 superfamily) unusual fold |
Superfamily d.175.1: Penicillin binding protein dimerisation domain [56519] (2 families) automatically mapped to Pfam PF03717 |
Family d.175.1.0: automated matches [227232] (1 protein) not a true family |
Protein automated matches [226981] (9 species) not a true protein |
Atopobium parvulum [TaxId:521095] [237724] (1 PDB entry) |
Domain d4ovda1: 4ovd A:61-231 [237726] Other proteins in same PDB: d4ovda2 automated match to d3equa1 complexed with ca |
Neisseria gonorrhoeae [TaxId:485] [225540] (2 PDB entries) |
Domain d3equa1: 3equ A:63-237 [209614] Other proteins in same PDB: d3equa2, d3equb2 automated match to d1qmea3 complexed with gol, so4 |
Domain d3equb1: 3equ B:65-237 [209616] Other proteins in same PDB: d3equa2, d3equb2 automated match to d1qmea3 complexed with gol, so4 |
Domain d3eqva1: 3eqv A:53-237 [232067] Other proteins in same PDB: d3eqva2, d3eqvb2 automated match to d3equa1 complexed with gol, so4; mutant |
Domain d3eqvb1: 3eqv B:66-237 [232066] Other proteins in same PDB: d3eqva2, d3eqvb2 automated match to d4kqoa1 complexed with gol, so4; mutant |
Pseudomonas aeruginosa [TaxId:1163392] [271725] (1 PDB entry) |
Domain d4weka1: 4wek A:295-465 [271726] Other proteins in same PDB: d4weka2 automated match to d4kqra1 complexed with 3lc |
Pseudomonas aeruginosa [TaxId:1279008] [257303] (2 PDB entries) |
Domain d4oola1: 4ool A:53-221 [257304] Other proteins in same PDB: d4oola2 automated match to d4kqra1 complexed with 2u2 |
Domain d4ooma1: 4oom A:54-221 [257307] Other proteins in same PDB: d4ooma2 automated match to d4kqra1 complexed with 2u3 |
Pseudomonas aeruginosa [TaxId:208964] [228776] (15 PDB entries) |
Domain d3oc2a1: 3oc2 A:50-221 [233065] Other proteins in same PDB: d3oc2a2 automated match to d4kqoa1 complexed with cl |
Domain d3ocla1: 3ocl A:53-221 [233071] Other proteins in same PDB: d3ocla2 automated match to d4kqoa1 complexed with cb9, cl, gol |
Domain d3ocna1: 3ocn A:50-221 [233073] Other proteins in same PDB: d3ocna2 automated match to d4kqoa1 complexed with ctj |
Domain d3pbna1: 3pbn A:60-221 [233209] Other proteins in same PDB: d3pbna2 automated match to d4kqoa1 |
Domain d3pboa1: 3pbo A:58-221 [233211] Other proteins in same PDB: d3pboa2 automated match to d4kqoa1 complexed with caz |
Domain d3pbqa1: 3pbq A:53-221 [248454] Other proteins in same PDB: d3pbqa2 automated match to d3pboa1 complexed with im2 |
Domain d3pbra1: 3pbr A:54-221 [248456] Other proteins in same PDB: d3pbra2 automated match to d3pboa1 complexed with mer |
Domain d3pbsa1: 3pbs A:53-221 [248458] Other proteins in same PDB: d3pbsa2 automated match to d3pboa1 complexed with azr |
Domain d3pbta1: 3pbt A:53-221 [248460] Other proteins in same PDB: d3pbta2 automated match to d3pboa1 complexed with ue1 |
Domain d4kqoa1: 4kqo A:50-221 [228777] Other proteins in same PDB: d4kqoa2, d4kqob2 automated match to d3equa1 complexed with cl, gol, imd, jpp |
Domain d4kqob1: 4kqo B:58-221 [235207] Other proteins in same PDB: d4kqoa2, d4kqob2 automated match to d4kqoa1 complexed with cl, gol, imd, jpp |
Domain d4kqqa1: 4kqq A:51-221 [235213] Other proteins in same PDB: d4kqqa2, d4kqqb2 automated match to d4kqoa1 complexed with cl, gol, imd, vpp |
Domain d4kqqb1: 4kqq B:57-221 [235209] Other proteins in same PDB: d4kqqa2, d4kqqb2 automated match to d4kqoa1 complexed with cl, gol, imd, vpp |
Domain d4kqra1: 4kqr A:51-221 [235211] Other proteins in same PDB: d4kqra2, d4kqrb2 automated match to d4kqoa1 complexed with cl, gol, imd, vpp |
Domain d4kqrb1: 4kqr B:53-221 [235215] Other proteins in same PDB: d4kqra2, d4kqrb2 automated match to d4kqoa1 complexed with cl, gol, imd, vpp |
Domain d5df7a1: 5df7 A:50-221 [280309] Other proteins in same PDB: d5df7a2, d5df7b2 automated match to d4kqra1 complexed with 59h, cl, gol, imd |
Domain d5df8a1: 5df8 A:51-221 [280311] Other proteins in same PDB: d5df8a2, d5df8b2 automated match to d4kqra1 complexed with 59f, cl, gol |
Domain d5df8b1: 5df8 B:57-221 [280313] Other proteins in same PDB: d5df8a2, d5df8b2 automated match to d4kqra1 complexed with 59f, cl, gol |
Domain d5df9a1: 5df9 A:53-221 [280307] Other proteins in same PDB: d5df9a2 automated match to d4kqra1 complexed with 59j, gol, so4 |
Pseudomonas aeruginosa [TaxId:287] [234430] (3 PDB entries) |
Domain d4fsfa1: 4fsf A:53-221 [234431] Other proteins in same PDB: d4fsfa2 automated match to d4kqoa1 complexed with 0w0 |
Domain d4l0la1: 4l0l A:53-221 [235253] Other proteins in same PDB: d4l0la2 automated match to d4kqoa1 complexed with pfv |
Domain d5df7b1: 5df7 B:57-221 [280304] Other proteins in same PDB: d5df7a2, d5df7b2 automated match to d4kqra1 complexed with 59h, cl, gol, imd |
Pseudomonas aeruginosa [TaxId:652611] [271719] (2 PDB entries) |
Domain d4weja1: 4wej A:51-221 [271720] Other proteins in same PDB: d4weja2 automated match to d4kqra1 complexed with 3lb |
Domain d4wela1: 4wel A:51-221 [271721] Other proteins in same PDB: d4wela2 automated match to d4kqra1 complexed with 3le |
Staphylococcus aureus [TaxId:1280] [256159] (3 PDB entries) |
Domain d3zg5a2: 3zg5 A:139-327 [250786] Other proteins in same PDB: d3zg5a1, d3zg5a3, d3zg5b1, d3zg5b3 automated match to d1vqqa2 complexed with cd, cl |
Domain d3zg5b2: 3zg5 B:139-327 [250789] Other proteins in same PDB: d3zg5a1, d3zg5a3, d3zg5b1, d3zg5b3 automated match to d1vqqa2 complexed with cd, cl |
Domain d4bl2a2: 4bl2 A:139-327 [256552] Other proteins in same PDB: d4bl2a1, d4bl2a3, d4bl2b1, d4bl2b3 automated match to d1vqqa2 complexed with cd, cl; mutant |
Domain d4bl2b2: 4bl2 B:139-327 [256555] Other proteins in same PDB: d4bl2a1, d4bl2a3, d4bl2b1, d4bl2b3 automated match to d1vqqa2 complexed with cd, cl; mutant |
Domain d4bl3a2: 4bl3 A:139-327 [256558] Other proteins in same PDB: d4bl3a1, d4bl3a3, d4bl3b1, d4bl3b3 automated match to d1vqqa2 complexed with cd, cl, mur; mutant |
Domain d4bl3b2: 4bl3 B:139-327 [259320] Other proteins in same PDB: d4bl3a1, d4bl3a3, d4bl3b1, d4bl3b3 automated match to d1vqqa2 complexed with cd, cl, mur; mutant |
Staphylococcus aureus [TaxId:158878] [256156] (4 PDB entries) |
Domain d3zfza2: 3zfz A:139-327 [250774] Other proteins in same PDB: d3zfza1, d3zfza3, d3zfzb1, d3zfzb3 automated match to d1vqqa2 complexed with 1w8, ai8, cd, cl, mur |
Domain d3zfzb2: 3zfz B:139-327 [250777] Other proteins in same PDB: d3zfza1, d3zfza3, d3zfzb1, d3zfzb3 automated match to d1vqqa2 complexed with 1w8, ai8, cd, cl, mur |
Domain d3zg0a2: 3zg0 A:139-327 [250780] Other proteins in same PDB: d3zg0a1, d3zg0a3, d3zg0b1, d3zg0b3 automated match to d1vqqa2 complexed with 1w8, ai8, cd, cl, mur |
Domain d3zg0b2: 3zg0 B:139-327 [250783] Other proteins in same PDB: d3zg0a1, d3zg0a3, d3zg0b1, d3zg0b3 automated match to d1vqqa2 complexed with 1w8, ai8, cd, cl, mur |
Domain d4cjna2: 4cjn A:139-327 [269622] Other proteins in same PDB: d4cjna1, d4cjna3, d4cjnb1, d4cjnb3 automated match to d1vqqa2 complexed with cd, cl, mur, qnz |
Domain d4cjnb2: 4cjn B:139-327 [269621] Other proteins in same PDB: d4cjna1, d4cjna3, d4cjnb1, d4cjnb3 automated match to d1vqqa2 complexed with cd, cl, mur, qnz |
Domain d4cpka2: 4cpk A:139-327 [262607] Other proteins in same PDB: d4cpka1, d4cpka3, d4cpkb1, d4cpkb3 automated match to d1vqqa2 complexed with cd, cl, mur; mutant |
Domain d4cpkb2: 4cpk B:139-327 [259338] Other proteins in same PDB: d4cpka1, d4cpka3, d4cpkb1, d4cpkb3 automated match to d1vqqa2 complexed with cd, cl, mur; mutant |
Timeline for Protein automated matches from d.175.1.0: automated matches: