Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2413227Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2422501Superfamily c.1.11: Enolase C-terminal domain-like [51604] (3 families) (S)
    binds metal ion (magnesium or manganese) in conserved site inside barrel
    N-terminal alpha+beta domain is common to this superfamily
  5. 2422502Family c.1.11.1: Enolase [51605] (2 proteins)
    automatically mapped to Pfam PF00113
  6. 2422604Protein automated matches [226973] (7 species)
    not a true protein

Species:

  1. 2422605Bacillus subtilis [TaxId:1423] [226436] (1 PDB entry)
  2. 2422610Escherichia coli [TaxId:83333] [337032] (1 PDB entry)
  3. 2422615Fruit fly (Drosophila melanogaster) [TaxId:7227] [333608] (1 PDB entry)
  4. 2422617Human (Homo sapiens) [TaxId:9606] [225520] (3 PDB entries)
    1. Domains for 2psn:
      1. 2422620Domain d2psna2: 2psn A:140-432 [205629]
        Other proteins in same PDB: d2psna1, d2psnb1, d2psnc1, d2psnd1
        automated match to d1pdza1
        complexed with mg, po4
      2. 2422621Domain d2psnb2: 2psn B:140-432 [205631]
        Other proteins in same PDB: d2psna1, d2psnb1, d2psnc1, d2psnd1
        automated match to d1pdza1
        complexed with mg, po4
      3. 2422622Domain d2psnc2: 2psn C:140-433 [205633]
        Other proteins in same PDB: d2psna1, d2psnb1, d2psnc1, d2psnd1
        automated match to d1pdza1
        complexed with mg, po4
      4. 2422623Domain d2psnd2: 2psn D:140-431 [205635]
        Other proteins in same PDB: d2psna1, d2psnb1, d2psnc1, d2psnd1
        automated match to d1pdza1
        complexed with mg, po4
    2. Domains for 2xsx:
      1. 2422618Domain d2xsxa2: 2xsx A:141-434 [207331]
        Other proteins in same PDB: d2xsxa1, d2xsxb1, d2xsxb3
        automated match to d1pdza1
        complexed with edo, mg, po4
      2. 2422619Domain d2xsxb2: 2xsx B:141-434 [207333]
        Other proteins in same PDB: d2xsxa1, d2xsxb1, d2xsxb3
        automated match to d1pdza1
        complexed with edo, mg, po4
    3. Domains for 3b97:
      1. 2422624Domain d3b97a2: 3b97 A:140-432 [208563]
        Other proteins in same PDB: d3b97a1, d3b97b1, d3b97c1, d3b97d1
        automated match to d1pdza1
        complexed with mg, so4
      2. 2422625Domain d3b97b2: 3b97 B:140-432 [208565]
        Other proteins in same PDB: d3b97a1, d3b97b1, d3b97c1, d3b97d1
        automated match to d1pdza1
        complexed with mg, so4
      3. 2422626Domain d3b97c2: 3b97 C:140-433 [208567]
        Other proteins in same PDB: d3b97a1, d3b97b1, d3b97c1, d3b97d1
        automated match to d1pdza1
        complexed with mg, so4
      4. 2422627Domain d3b97d2: 3b97 D:140-431 [208569]
        Other proteins in same PDB: d3b97a1, d3b97b1, d3b97c1, d3b97d1
        automated match to d1pdza1
        complexed with mg, so4
  5. 2422628Streptococcus suis [TaxId:1307] [226502] (1 PDB entry)
  6. 2422631Trypanosoma cruzi [TaxId:353153] [226458] (1 PDB entry)
  7. 3059437Escherichia coli [TaxId:562] [359500] (2 PDB entries)
    1. Domains for 6bfy:
      1. 3059440Domain d6bfyc2: 6bfy C:140-431 [359503]
        Other proteins in same PDB: d6bfya1, d6bfya3, d6bfyb1, d6bfyb3, d6bfyc1, d6bfyc3, d6bfyd1, d6bfyd3, d6bfye1, d6bfye3, d6bfyf1, d6bfyf3
        automated match to d2fymc1
        complexed with 2pg, gol, mg, so4
      2. 3059441Domain d6bfyb2: 6bfy B:140-430 [359502]
        Other proteins in same PDB: d6bfya1, d6bfya3, d6bfyb1, d6bfyb3, d6bfyc1, d6bfyc3, d6bfyd1, d6bfyd3, d6bfye1, d6bfye3, d6bfyf1, d6bfyf3
        automated match to d2fymc1
        complexed with 2pg, gol, mg, so4
      3. 3059476Domain d6bfyf2: 6bfy F:140-431 [359538]
        Other proteins in same PDB: d6bfya1, d6bfya3, d6bfyb1, d6bfyb3, d6bfyc1, d6bfyc3, d6bfyd1, d6bfyd3, d6bfye1, d6bfye3, d6bfyf1, d6bfyf3
        automated match to d2fymc1
        complexed with 2pg, gol, mg, so4
      4. 3059630Domain d6bfya2: 6bfy A:140-431 [359692]
        Other proteins in same PDB: d6bfya1, d6bfya3, d6bfyb1, d6bfyb3, d6bfyc1, d6bfyc3, d6bfyd1, d6bfyd3, d6bfye1, d6bfye3, d6bfyf1, d6bfyf3
        automated match to d2fymc1
        complexed with 2pg, gol, mg, so4
      5. 3059635Domain d6bfyd2: 6bfy D:140-430 [359697]
        Other proteins in same PDB: d6bfya1, d6bfya3, d6bfyb1, d6bfyb3, d6bfyc1, d6bfyc3, d6bfyd1, d6bfyd3, d6bfye1, d6bfye3, d6bfyf1, d6bfyf3
        automated match to d2fymc1
        complexed with 2pg, gol, mg, so4
      6. 3059655Domain d6bfye2: 6bfy E:140-430 [359717]
        Other proteins in same PDB: d6bfya1, d6bfya3, d6bfyb1, d6bfyb3, d6bfyc1, d6bfyc3, d6bfyd1, d6bfyd3, d6bfye1, d6bfye3, d6bfyf1, d6bfyf3
        automated match to d2fymc1
        complexed with 2pg, gol, mg, so4
    2. Domains for 6bfz:
      1. 3059443Domain d6bfzb2: 6bfz B:140-431 [359505]
        Other proteins in same PDB: d6bfza1, d6bfza3, d6bfzb1, d6bfzb3, d6bfzc1, d6bfzc3, d6bfzd1, d6bfzd3, d6bfze1, d6bfze3, d6bfzf1, d6bfzf3
        automated match to d2fymc1
        complexed with 2pg, gol, mes, mg, pep, so4
      2. 3059461Domain d6bfza2: 6bfz A:140-431 [359523]
        Other proteins in same PDB: d6bfza1, d6bfza3, d6bfzb1, d6bfzb3, d6bfzc1, d6bfzc3, d6bfzd1, d6bfzd3, d6bfze1, d6bfze3, d6bfzf1, d6bfzf3
        automated match to d2fymc1
        complexed with 2pg, gol, mes, mg, pep, so4
      3. 3059572Domain d6bfzc2: 6bfz C:140-431 [359634]
        Other proteins in same PDB: d6bfza1, d6bfza3, d6bfzb1, d6bfzb3, d6bfzc1, d6bfzc3, d6bfzd1, d6bfzd3, d6bfze1, d6bfze3, d6bfzf1, d6bfzf3
        automated match to d2fymc1
        complexed with 2pg, gol, mes, mg, pep, so4
      4. 3059615Domain d6bfze2: 6bfz E:140-431 [359677]
        Other proteins in same PDB: d6bfza1, d6bfza3, d6bfzb1, d6bfzb3, d6bfzc1, d6bfzc3, d6bfzd1, d6bfzd3, d6bfze1, d6bfze3, d6bfzf1, d6bfzf3
        automated match to d2fymc1
        complexed with 2pg, gol, mes, mg, pep, so4
      5. 3059639Domain d6bfzf2: 6bfz F:140-430 [359701]
        Other proteins in same PDB: d6bfza1, d6bfza3, d6bfzb1, d6bfzb3, d6bfzc1, d6bfzc3, d6bfzd1, d6bfzd3, d6bfze1, d6bfze3, d6bfzf1, d6bfzf3
        automated match to d2fymc1
        complexed with 2pg, gol, mes, mg, pep, so4
      6. 3059646Domain d6bfzd2: 6bfz D:140-431 [359708]
        Other proteins in same PDB: d6bfza1, d6bfza3, d6bfzb1, d6bfzb3, d6bfzc1, d6bfzc3, d6bfzd1, d6bfzd3, d6bfze1, d6bfze3, d6bfzf1, d6bfzf3
        automated match to d2fymc1
        complexed with 2pg, gol, mes, mg, pep, so4

More info for Protein automated matches from c.1.11.1: Enolase

Timeline for Protein automated matches from c.1.11.1: Enolase: