Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2581248Class g: Small proteins [56992] (98 folds)
  3. 2581531Fold g.3: Knottins (small inhibitors, toxins, lectins) [57015] (19 superfamilies)
    disulfide-bound fold; contains beta-hairpin with two adjacent disulfides
  4. 2582603Superfamily g.3.11: EGF/Laminin [57196] (8 families) (S)
  5. 2583282Family g.3.11.0: automated matches [227227] (1 protein)
    not a true family
  6. 2583283Protein automated matches [226968] (4 species)
    not a true protein

Species:

  1. 2583284Human (Homo sapiens) [TaxId:9606] [225423] (29 PDB entries)
    1. Domain for 1w0y:
    2. Domain for 1w2k:
    3. Domain for 2aer:
    4. Domain for 2ec9:
    5. Domain for 2fd6:
    6. Domains for 2vj3:
      1. 2583327Domain d2vj3a1: 2vj3 A:411-452 [153180]
        Other proteins in same PDB: d2vj3a4
        automated match to d2vj3a1
        complexed with ca, cl, na
      2. 2583328Domain d2vj3a2: 2vj3 A:453-491 [153181]
        Other proteins in same PDB: d2vj3a4
        automated match to d2vj3a2
        complexed with ca, cl, na
      3. 2583329Domain d2vj3a3: 2vj3 A:492-526 [153182]
        Other proteins in same PDB: d2vj3a4
        automated match to d2vj3a3
        complexed with ca, cl, na
    7. Domain for 2w2m:
    8. Domain for 2w2n:
    9. Domain for 2w2o:
    10. Domain for 2w2p:
    11. Domain for 2w2q:
    12. Domain for 3cfw:
    13. Domains for 3dem:
      1. 2583312Domain d3dema2: 3dem A:121-165 [245627]
        Other proteins in same PDB: d3dema1, d3dema3, d3demb1, d3demb3
        automated match to d1nt0a3
        complexed with ca, nag
      2. 2583313Domain d3demb2: 3dem B:121-165 [245630]
        Other proteins in same PDB: d3dema1, d3dema3, d3demb1, d3demb3
        automated match to d1nt0a3
        complexed with ca, nag
    14. Domain for 3gcw:
    15. Domain for 3gcx:
    16. Domains for 3gis:
      1. 2583318Domain d3gisx1: 3gis X:349-387 [246316]
        automated match to d1dx5i1
        complexed with ca, so4
      2. 2583319Domain d3gisx2: 3gis X:388-422 [246317]
        automated match to d1dx5i2
        complexed with ca, so4
      3. 2583320Domain d3gisx3: 3gis X:423-463 [246318]
        automated match to d1dx5i3
        complexed with ca, so4
      4. 2583321Domain d3gisy1: 3gis Y:348-387 [246319]
        automated match to d1dx5i1
        complexed with ca, so4
      5. 2583322Domain d3gisy2: 3gis Y:388-422 [246320]
        automated match to d1dx5i2
        complexed with ca, so4
      6. 2583323Domain d3gisy3: 3gis Y:423-463 [246321]
        automated match to d1dx5i3
        complexed with ca, so4
      7. 2583324Domain d3gisz1: 3gis Z:350-387 [246322]
        automated match to d1dx5i1
        complexed with ca, so4
      8. 2583325Domain d3gisz2: 3gis Z:388-422 [246323]
        automated match to d1dx5i2
        complexed with ca, so4
      9. 2583326Domain d3gisz3: 3gis Z:423-463 [246324]
        automated match to d1dx5i3
        complexed with ca, so4
    17. Domain for 3th2:
    18. Domain for 3th3:
    19. Domain for 3th4:
    20. Domains for 4cud:
      1. 2583293Domain d4cuda1: 4cud A:412-452 [256714]
        Other proteins in same PDB: d4cuda4
        automated match to d1toza1
        complexed with ca, fuc; mutant
      2. 2583294Domain d4cuda2: 4cud A:453-491 [256715]
        Other proteins in same PDB: d4cuda4
        automated match to d1toza2
        complexed with ca, fuc; mutant
      3. 2583295Domain d4cuda3: 4cud A:492-526 [256716]
        Other proteins in same PDB: d4cuda4
        automated match to d1toza3
        complexed with ca, fuc; mutant
    21. Domains for 4cue:
      1. 2583334Domain d4cuea1: 4cue A:412-452 [256717]
        Other proteins in same PDB: d4cuea4
        automated match to d1toza1
        complexed with ca; mutant
      2. 2583335Domain d4cuea2: 4cue A:453-491 [256718]
        Other proteins in same PDB: d4cuea4
        automated match to d1toza2
        complexed with ca; mutant
      3. 2583336Domain d4cuea3: 4cue A:492-526 [256719]
        Other proteins in same PDB: d4cuea4
        automated match to d1toza3
        complexed with ca; mutant
    22. Domains for 4cuf:
      1. 2583314Domain d4cufa1: 4cuf A:412-452 [256720]
        Other proteins in same PDB: d4cufa4
        automated match to d1toza1
        complexed with ca, edo; mutant
      2. 2583315Domain d4cufa2: 4cuf A:453-491 [256721]
        Other proteins in same PDB: d4cufa4
        automated match to d1toza2
        complexed with ca, edo; mutant
      3. 2583316Domain d4cufa3: 4cuf A:492-526 [256722]
        Other proteins in same PDB: d4cufa4
        automated match to d1toza3
        complexed with ca, edo; mutant
    23. Domains for 4d0e:
      1. 2583288Domain d4d0ea1: 4d0e A:412-452 [266139]
        Other proteins in same PDB: d4d0ea4
        automated match to d4d0fa1
        complexed with ca; mutant
      2. 2583289Domain d4d0ea2: 4d0e A:453-491 [266140]
        Other proteins in same PDB: d4d0ea4
        automated match to d4d0fa2
        complexed with ca; mutant
      3. 2583290Domain d4d0ea3: 4d0e A:492-526 [266141]
        Other proteins in same PDB: d4d0ea4
        automated match to d4d0fa3
        complexed with ca; mutant
    24. Domains for 4d0f:
      1. 2583330Domain d4d0fa1: 4d0f A:411-452 [256762]
        Other proteins in same PDB: d4d0fa4, d4d0fa5
        automated match to d1toza1
        complexed with ca, edo; mutant
      2. 2583331Domain d4d0fa2: 4d0f A:453-491 [256763]
        Other proteins in same PDB: d4d0fa4, d4d0fa5
        automated match to d1toza2
        complexed with ca, edo; mutant
      3. 2583332Domain d4d0fa3: 4d0f A:492-526 [256764]
        Other proteins in same PDB: d4d0fa4, d4d0fa5
        automated match to d1toza3
        complexed with ca, edo; mutant
    25. Domain for 5l0r:
    26. Domains for 5mwb:
      1. 2583298Domain d5mwba1: 5mwb A:415-456 [335365]
        automated match to d1toza1
        complexed with bgc, ca, fuc, xyp
      2. 2583299Domain d5mwba2: 5mwb A:457-495 [335366]
        automated match to d1toza2
        complexed with bgc, ca, fuc, xyp
      3. 2583300Domain d5mwba3: 5mwb A:496-532 [335367]
        automated match to d1toza3
        complexed with bgc, ca, fuc, xyp
    27. Domain for 5ub5:
    28. Domain for 5vc1:
    29. Domain for 5wb8:
  2. 2583337Mouse (Mus musculus) [TaxId:10090] [334104] (4 PDB entries)
    1. Domain for 5ky0:
    2. Domain for 5ky4:
    3. Domain for 5ky8:
    4. Domain for 5ky9:
  3. 2583342Norway rat (Rattus norvegicus) [TaxId:10116] [270149] (4 PDB entries)
    1. Domains for 4xl1:
      1. 2583343Domain d4xl1a1: 4xl1 A:414-452 [270153]
        Other proteins in same PDB: d4xl1a4, d4xl1d4, d4xl1d5
        automated match to d4d0fa1
        complexed with bgc, ca, fuc, nag
      2. 2583344Domain d4xl1a2: 4xl1 A:453-491 [270154]
        Other proteins in same PDB: d4xl1a4, d4xl1d4, d4xl1d5
        automated match to d4d0fa2
        complexed with bgc, ca, fuc, nag
      3. 2583345Domain d4xl1a3: 4xl1 A:492-526 [270155]
        Other proteins in same PDB: d4xl1a4, d4xl1d4, d4xl1d5
        automated match to d4d0fa3
        complexed with bgc, ca, fuc, nag
      4. 2583346Domain d4xl1d1: 4xl1 D:412-452 [270150]
        Other proteins in same PDB: d4xl1a4, d4xl1d4, d4xl1d5
        automated match to d4d0fa1
        complexed with bgc, ca, fuc, nag
      5. 2583347Domain d4xl1d2: 4xl1 D:453-491 [270151]
        Other proteins in same PDB: d4xl1a4, d4xl1d4, d4xl1d5
        automated match to d4d0fa2
        complexed with bgc, ca, fuc, nag
      6. 2583348Domain d4xl1d3: 4xl1 D:492-526 [270152]
        Other proteins in same PDB: d4xl1a4, d4xl1d4, d4xl1d5
        automated match to d4d0fa3
        complexed with bgc, ca, fuc, nag
    2. Domain for 5cis:
    3. Domain for 5ckm:
    4. Domains for 5ckn:
      1. 2583350Domain d5ckna2: 5ckn A:120-164 [328510]
        Other proteins in same PDB: d5ckna1, d5ckna3, d5cknd1, d5cknd3
        automated match to d1nt0a3
        complexed with ca
      2. 2583351Domain d5cknd2: 5ckn D:120-164 [328448]
        Other proteins in same PDB: d5ckna1, d5ckna3, d5cknd1, d5cknd3
        automated match to d1nt0a3
        complexed with ca
  4. Sheep (Ovis aries) [TaxId:9940] [255535] (2 PDB entries)
    1. Domain for 2oye:
    2. Domain for 2oyu:

More info for Protein automated matches from g.3.11.0: automated matches

Timeline for Protein automated matches from g.3.11.0: automated matches: