Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2435068Fold c.10: Leucine-rich repeat, LRR (right-handed beta-alpha superhelix) [52046] (3 superfamilies)
    2 curved layers, a/b; parallel beta-sheet; order 1234...N; there are sequence similarities between different superfamilies
  4. 2435137Superfamily c.10.2: L domain-like [52058] (9 families) (S)
    less regular structure consisting of variable repeats
  5. 2435138Family c.10.2.1: Internalin LRR domain [52059] (4 proteins)
    capped at the N-end with a truncated EF-hand subdomain
  6. 2435163Protein automated matches [226952] (2 species)
    not a true protein

Species:

  1. 2435164Listeria monocytogenes [TaxId:169963] [225326] (6 PDB entries)
    1. Domains for 2uzx:
      1. 2435177Domain d2uzxa1: 2uzx A:34-240 [206192]
        Other proteins in same PDB: d2uzxa2, d2uzxc2
        automated match to d1m9sa5
      2. 2435178Domain d2uzxc1: 2uzx C:34-240 [206194]
        Other proteins in same PDB: d2uzxa2, d2uzxc2
        automated match to d1m9sa5
    2. Domains for 2wqu:
      1. 2435169Domain d2wqua1: 2wqu A:36-240 [206944]
        Other proteins in same PDB: d2wqua2, d2wqub2, d2wquc2, d2wqud2, d2wque2, d2wquf2
        automated match to d1m9sa5
        complexed with gol, so4
      2. 2435170Domain d2wqub1: 2wqu B:36-240 [206946]
        Other proteins in same PDB: d2wqua2, d2wqub2, d2wquc2, d2wqud2, d2wque2, d2wquf2
        automated match to d1m9sa5
        complexed with gol, so4
      3. 2435171Domain d2wquc1: 2wqu C:36-240 [206948]
        Other proteins in same PDB: d2wqua2, d2wqub2, d2wquc2, d2wqud2, d2wque2, d2wquf2
        automated match to d1m9sa5
        complexed with gol, so4
      4. 2435172Domain d2wqud1: 2wqu D:37-240 [206950]
        Other proteins in same PDB: d2wqua2, d2wqub2, d2wquc2, d2wqud2, d2wque2, d2wquf2
        automated match to d1m9sa5
        complexed with gol, so4
      5. 2435173Domain d2wque1: 2wqu E:37-240 [206952]
        Other proteins in same PDB: d2wqua2, d2wqub2, d2wquc2, d2wqud2, d2wque2, d2wquf2
        automated match to d1m9sa5
        complexed with gol, so4
      6. 2435174Domain d2wquf1: 2wqu F:37-240 [206954]
        Other proteins in same PDB: d2wqua2, d2wqub2, d2wquc2, d2wqud2, d2wque2, d2wquf2
        automated match to d1m9sa5
        complexed with gol, so4
    3. Domains for 2wqv:
      1. 2435175Domain d2wqva1: 2wqv A:37-240 [206956]
        Other proteins in same PDB: d2wqva2, d2wqvb2
        automated match to d1m9sa5
        complexed with pg4, pge
      2. 2435176Domain d2wqvb1: 2wqv B:37-240 [206958]
        Other proteins in same PDB: d2wqva2, d2wqvb2
        automated match to d1m9sa5
        complexed with pg4, pge
    4. Domains for 2wqw:
      1. 2435167Domain d2wqwa1: 2wqw A:36-240 [206960]
        Other proteins in same PDB: d2wqwa2, d2wqwb2
        automated match to d1m9sa5
        complexed with peg
      2. 2435168Domain d2wqwb1: 2wqw B:36-240 [206962]
        Other proteins in same PDB: d2wqwa2, d2wqwb2
        automated match to d1m9sa5
        complexed with peg
    5. Domains for 2wqx:
      1. 2435165Domain d2wqxa1: 2wqx A:36-240 [206964]
        Other proteins in same PDB: d2wqxa2, d2wqxb2
        automated match to d1m9sa5
        mutant
      2. 2435166Domain d2wqxb1: 2wqx B:36-240 [206966]
        Other proteins in same PDB: d2wqxa2, d2wqxb2
        automated match to d1m9sa5
        mutant
    6. Domain for 6dbg:
  2. 3054814Listeria monocytogenes [TaxId:1639] [354876] (3 PDB entries)
    1. Domain for 6dbf:
    2. Domain for 6dbg:
    3. Domain for 6u12:

More info for Protein automated matches from c.10.2.1: Internalin LRR domain

Timeline for Protein automated matches from c.10.2.1: Internalin LRR domain: