Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2170735Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2224083Fold d.148: Hect, E3 ligase catalytic domain [56203] (1 superfamily)
    consists of two alpha+beta domains; the N-terminal domain is array of helices and beta-hairpins; the C-terminal domain is an a/b sandwich with one left-handed beta-alpha(n)-beta unit; conformational flexibility of domain orientation
  4. 2224084Superfamily d.148.1: Hect, E3 ligase catalytic domain [56204] (2 families) (S)
    automatically mapped to Pfam PF00632
  5. 2224100Family d.148.1.0: automated matches [227207] (1 protein)
    not a true family
  6. 2224101Protein automated matches [226939] (2 species)
    not a true protein

Species:

  1. 2224102Human (Homo sapiens) [TaxId:9606] [225255] (16 PDB entries)
    1. Domain for 1zvd:
    2. Domain for 2oni:
    3. Domains for 2xbb:
      1. 2224109Domain d2xbba_: 2xbb A: [231566]
        Other proteins in same PDB: d2xbbc_, d2xbbd_
        automated match to d2onia_
        complexed with gol
      2. 2224110Domain d2xbbb_: 2xbb B: [231567]
        Other proteins in same PDB: d2xbbc_, d2xbbd_
        automated match to d2onia_
        complexed with gol
    4. Domain for 2xbf:
    5. Domain for 3h1d:
    6. Domains for 3jw0:
      1. 2224115Domain d3jw0c1: 3jw0 C:576-950 [247066]
        Other proteins in same PDB: d3jw0a_, d3jw0b_, d3jw0c2, d3jw0x_, d3jw0y_
        automated match to d4bbna_
      2. 2224116Domain d3jw0d_: 3jw0 D: [247067]
        Other proteins in same PDB: d3jw0a_, d3jw0b_, d3jw0c2, d3jw0x_, d3jw0y_
        automated match to d4bbna_
    7. Domain for 4bbn:
    8. Domain for 4be8:
    9. Domain for 4y07:
    10. Domains for 5c7j:
      1. 2224121Domain d5c7ja_: 5c7j A: [312674]
        automated match to d2xbba_
      2. 2224122Domain d5c7jb_: 5c7j B: [312825]
        automated match to d2xbba_
    11. Domain for 5c7m:
    12. Domain for 5c91:
    13. Domain for 5hpk:
    14. Domain for 5hps:
    15. Domains for 5hpt:
      1. 2224118Domain d5hpta_: 5hpt A: [316098]
        automated match to d4y07a_
      2. 2224119Domain d5hptd_: 5hpt D: [316127]
        automated match to d4y07a_
      3. 2224120Domain d5hptg_: 5hpt G: [316169]
        automated match to d4y07a_
    16. Domain for 5tjq:
  2. 2224124Saccharomyces cerevisiae [TaxId:4932] [314772] (1 PDB entry)

More info for Protein automated matches from d.148.1.0: automated matches

Timeline for Protein automated matches from d.148.1.0: automated matches: