SCOPe 2.05: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.05
Class d: Alpha and beta proteins (a+b) [53931] (381 folds)

Fold d.148: Hect, E3 ligase catalytic domain [56203] (1 superfamily)
consists of two alpha+beta domains; the N-terminal domain is array of helices and beta-hairpins; the C-terminal domain is an a/b sandwich with one left-handed beta-alpha(n)-beta unit; conformational flexibility of domain orientation

Superfamily d.148.1: Hect, E3 ligase catalytic domain [56204] (2 families)
automatically mapped to Pfam PF00632
Family d.148.1.0: automated matches [227207] (1 protein)
not a true family
Protein automated matches [226939] (1 species)
not a true protein

Species:

Human (Homo sapiens) [TaxId:9606] [225255] (10 PDB entries)
1. Domain for 1zvd:
  - Domain d1zvda_: 1zvd A: [230463]
    automated match to d3tuga_
    complexed with na, po4
2. Domain for 2oni:
  - Domain d2onia_: 2oni A: [205341]
    automated match to d1nd7a_
    complexed with na
3. Domains for 2xbb:
  1. Domain d2xbba_: 2xbb A: [231566]
    Other proteins in same PDB: d2xbbc_, d2xbbd_
    automated match to d2onia_
    complexed with gol
  2. Domain d2xbbb_: 2xbb B: [231567]
    Other proteins in same PDB: d2xbbc_, d2xbbd_
    automated match to d2onia_
    complexed with gol
4. Domain for 2xbf:
  - Domain d2xbfa_: 2xbf A: [231568]
    automated match to d2onia_
    complexed with ca, edo
5. Domain for 3h1d:
  - Domain d3h1da_: 3h1d A: [232357]
    automated match to d2onia_
    complexed with so4
6. Domains for 3jw0:
  1. Domain d3jw0c_: 3jw0 C: [247066]
    Other proteins in same PDB: d3jw0a_, d3jw0b_, d3jw0x_, d3jw0y_
    automated match to d4bbna_
  2. Domain d3jw0d_: 3jw0 D: [247067]
    Other proteins in same PDB: d3jw0a_, d3jw0b_, d3jw0x_, d3jw0y_
    automated match to d4bbna_
7. Domain for 4bbn:
  - Domain d4bbna_: 4bbn A: [234144]
    Other proteins in same PDB: d4bbnc_, d4bbnf_
    automated match to d2onia_
8. Domain for 4be8:
  - Domain d4be8a_: 4be8 A: [251225]
    automated match to d4bbna_
9. Domain for 4y07:
  - Domain d4y07a_: 4y07 A: [279045]
    automated match to d4bbna_
10. Domain for 5c91:
  - Domain d5c91a_: 5c91 A: [277506]
    automated match to d4bbna_
    complexed with 4yu

More info for Protein automated matches from d.148.1.0: automated matches

Timeline for Protein automated matches from d.148.1.0: automated matches:

Protein automated matches from d.148.1.0: automated matches first appeared in SCOPe 2.03
Protein automated matches from d.148.1.0: automated matches appears in SCOPe 2.04
Protein automated matches from d.148.1.0: automated matches appears in SCOPe 2.06
Protein automated matches from d.148.1.0: automated matches appears in the current release, SCOPe 2.08