Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 1976409Class a: All alpha proteins [46456] (289 folds)
  3. 2004058Fold a.102: alpha/alpha toroid [48207] (6 superfamilies)
    multihelical; up to seven alpha-hairpins are arranged in closed circular array; there may be sequence similarities between different superfamilies
  4. 2004426Superfamily a.102.4: Terpenoid cyclases/Protein prenyltransferases [48239] (5 families) (S)
  5. 2004750Family a.102.4.0: automated matches [227201] (1 protein)
    not a true family
  6. 2004751Protein automated matches [226931] (9 species)
    not a true protein

Species:

  1. 2004752Artemisia annua [TaxId:35608] [226616] (2 PDB entries)
    1. Domain for 4fjq:
    2. Domain for 4gax:
  2. 2004755Gossypium arboreum [TaxId:29729] [225678] (2 PDB entries)
    1. Domains for 3g4d:
      1. 2004756Domain d3g4da1: 3g4d A:25-226 [210351]
        Other proteins in same PDB: d3g4da2, d3g4db2
        automated match to d1hxga1
        complexed with bme, gol
      2. 2004757Domain d3g4db1: 3g4d B:28-226 [210353]
        Other proteins in same PDB: d3g4da2, d3g4db2
        automated match to d1hxga1
        complexed with bme, gol
    2. Domains for 3g4f:
      1. 2004758Domain d3g4fa1: 3g4f A:25-226 [210355]
        Other proteins in same PDB: d3g4fa2, d3g4fb2
        automated match to d1hxga1
        complexed with bme, fpf, mg
      2. 2004759Domain d3g4fb1: 3g4f B:25-226 [210357]
        Other proteins in same PDB: d3g4fa2, d3g4fb2
        automated match to d1hxga1
        complexed with bme, fpf, mg
  3. 2004760Mentha spicata [TaxId:29719] [225228] (2 PDB entries)
    1. Domains for 2ong:
      1. 2004763Domain d2onga1: 2ong A:57-271 [205333]
        Other proteins in same PDB: d2onga2, d2ongb2
        automated match to d1n1ba1
        complexed with btb, fpg, mn
      2. 2004764Domain d2ongb1: 2ong B:57-271 [205335]
        Other proteins in same PDB: d2onga2, d2ongb2
        automated match to d1n1ba1
        complexed with btb, fpg, mn
    2. Domains for 2onh:
      1. 2004761Domain d2onha1: 2onh A:57-271 [205337]
        Other proteins in same PDB: d2onha2, d2onhb2
        automated match to d1n1ba1
        complexed with btb, f3p, mn
      2. 2004762Domain d2onhb1: 2onh B:57-271 [205339]
        Other proteins in same PDB: d2onha2, d2onhb2
        automated match to d1n1ba1
        complexed with btb, f3p, mn
  4. 2004765Populus tremula [TaxId:80863] [225927] (2 PDB entries)
    1. Domains for 3n0f:
      1. 2004766Domain d3n0fa1: 3n0f A:57-265 [213665]
        Other proteins in same PDB: d3n0fa2, d3n0fb2
        automated match to d1hxga1
      2. 2004767Domain d3n0fb1: 3n0f B:57-265 [213667]
        Other proteins in same PDB: d3n0fa2, d3n0fb2
        automated match to d1hxga1
    2. Domains for 3n0g:
      1. 2004768Domain d3n0ga1: 3n0g A:63-265 [213669]
        Other proteins in same PDB: d3n0ga2, d3n0gb2
        automated match to d1hxga1
        complexed with dst, mg
      2. 2004769Domain d3n0gb1: 3n0g B:63-265 [213671]
        Other proteins in same PDB: d3n0ga2, d3n0gb2
        automated match to d1hxga1
        complexed with dst, mg
  5. 2004770Salvia fruticosa [TaxId:268906] [225284] (1 PDB entry)
  6. 2004773Thymus vulgaris [TaxId:49992] [280258] (1 PDB entry)
  7. 2004776Tobacco (Nicotiana tabacum) [TaxId:4097] [225865] (22 PDB entries)
    1. Domain for 3lz9:
    2. Domain for 3m00:
    3. Domain for 3m01:
    4. Domain for 3m02:
    5. Domain for 4rnq:
    6. Domain for 5dhi:
    7. Domain for 5dhk:
    8. Domain for 5ik0:
    9. Domain for 5ik6:
    10. Domain for 5ik9:
    11. Domain for 5ika:
    12. Domain for 5ikh:
    13. Domain for 5il3:
    14. Domain for 5il8:
    15. Domain for 5ild:
    16. Domain for 5ilh:
    17. Domain for 5ili:
    18. Domain for 5ilj:
    19. Domain for 5ilk:
    20. Domain for 5ily:
    21. Domain for 5ilz:
    22. Domain for 5im1:
  8. 2288881Citrus sinensis [TaxId:2711] [332182] (3 PDB entries)
    1. Domain for 5uv0:
    2. Domain for 5uv1:
    3. Domain for 5uv2:
  9. 2290432Hyoscyamus muticus [TaxId:35626] [333733] (1 PDB entry)

More info for Protein automated matches from a.102.4.0: automated matches

Timeline for Protein automated matches from a.102.4.0: automated matches: