Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2078560Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 2089241Superfamily c.1.17: Nicotinate/Quinolinate PRTase C-terminal domain-like [51690] (3 families) (S)
    incomplete beta/alpha barrel with parallel beta-sheet of 7 strands
  5. 2089313Family c.1.17.0: automated matches [227169] (1 protein)
    not a true family
  6. 2089314Protein automated matches [226879] (8 species)
    not a true protein

Species:

  1. 2089315Ehrlichia chaffeensis [TaxId:205920] [225806] (1 PDB entry)
  2. 2089320Francisella tularensis [TaxId:177416] [226222] (1 PDB entry)
  3. 2089323Helicobacter pylori [TaxId:210] [225051] (2 PDB entries)
    1. Domains for 2b7n:
      1. 2089324Domain d2b7na2: 2b7n A:103-273 [203562]
        Other proteins in same PDB: d2b7na1, d2b7nb1, d2b7nc1
        automated match to d1qapa1
        complexed with ntm, so4
      2. 2089325Domain d2b7nb2: 2b7n B:103-273 [203564]
        Other proteins in same PDB: d2b7na1, d2b7nb1, d2b7nc1
        automated match to d1qapa1
        complexed with ntm, so4
      3. 2089326Domain d2b7nc2: 2b7n C:103-273 [203566]
        Other proteins in same PDB: d2b7na1, d2b7nb1, d2b7nc1
        automated match to d1qapa1
        complexed with ntm, so4
    2. Domains for 2b7p:
      1. 2089327Domain d2b7pa2: 2b7p A:103-273 [203568]
        Other proteins in same PDB: d2b7pa1, d2b7pb1, d2b7pc1
        automated match to d1qapa1
        complexed with pht, so4
      2. 2089328Domain d2b7pb2: 2b7p B:103-273 [203570]
        Other proteins in same PDB: d2b7pa1, d2b7pb1, d2b7pc1
        automated match to d1qapa1
        complexed with pht, so4
      3. 2089329Domain d2b7pc2: 2b7p C:103-273 [203572]
        Other proteins in same PDB: d2b7pa1, d2b7pb1, d2b7pc1
        automated match to d1qapa1
        complexed with pht, so4
  4. 2089330Thermus thermophilus HB8 [TaxId:300852] [225063] (1 PDB entry)
  5. 2089334Vibrio cholerae [TaxId:243277] [226021] (2 PDB entries)
    1. Domains for 3paj:
      1. 2089337Domain d3paja2: 3paj A:129-296 [214737]
        Other proteins in same PDB: d3paja1, d3paja3, d3pajb1, d3pajb3
        automated match to d1qapa1
        complexed with mg
      2. 2089338Domain d3pajb2: 3paj B:129-294 [214739]
        Other proteins in same PDB: d3paja1, d3paja3, d3pajb1, d3pajb3
        automated match to d1qapa1
        complexed with mg
    2. Domains for 4hl7:
      1. 2089335Domain d4hl7a2: 4hl7 A:151-428 [262708]
        Other proteins in same PDB: d4hl7a1, d4hl7a3, d4hl7b1, d4hl7b3
        automated match to d4hl7b2
        complexed with so4
      2. 2089336Domain d4hl7b2: 4hl7 B:151-426 [252462]
        Other proteins in same PDB: d4hl7a1, d4hl7a3, d4hl7b1, d4hl7b3
        automated match to d3os4a2
        complexed with so4
  6. 2089339Yersinia pestis [TaxId:214092] [225973] (1 PDB entry)
  7. 2285557Streptococcus pyogenes [TaxId:1115816] [328858] (1 PDB entry)
  8. 2285562Streptococcus pyogenes [TaxId:471876] [328863] (1 PDB entry)

More info for Protein automated matches from c.1.17.0: automated matches

Timeline for Protein automated matches from c.1.17.0: automated matches: