Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2152203Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2168779Fold d.41: alpha/beta-Hammerhead [54664] (5 superfamilies)
    core: beta-BETA-alpha-beta-BETA-beta-alpha; contains a beta-hammerhead motif similar to that in barrel-sandwich hybrids
  4. 2168899Superfamily d.41.2: Nicotinate/Quinolinate PRTase N-terminal domain-like [54675] (3 families) (S)
  5. 2168971Family d.41.2.0: automated matches [227168] (1 protein)
    not a true family
  6. 2168972Protein automated matches [226878] (8 species)
    not a true protein

Species:

  1. 2168973Ehrlichia chaffeensis [TaxId:205920] [225805] (1 PDB entry)
  2. 2168978Francisella tularensis [TaxId:177416] [226221] (1 PDB entry)
  3. 2168981Helicobacter pylori [TaxId:210] [225050] (2 PDB entries)
    1. Domains for 2b7n:
      1. 2168982Domain d2b7na1: 2b7n A:1-102 [203561]
        Other proteins in same PDB: d2b7na2, d2b7nb2, d2b7nc2
        automated match to d1qapa2
        complexed with ntm, so4
      2. 2168983Domain d2b7nb1: 2b7n B:1-102 [203563]
        Other proteins in same PDB: d2b7na2, d2b7nb2, d2b7nc2
        automated match to d1qapa2
        complexed with ntm, so4
      3. 2168984Domain d2b7nc1: 2b7n C:1-102 [203565]
        Other proteins in same PDB: d2b7na2, d2b7nb2, d2b7nc2
        automated match to d1qapa2
        complexed with ntm, so4
    2. Domains for 2b7p:
      1. 2168985Domain d2b7pa1: 2b7p A:1-102 [203567]
        Other proteins in same PDB: d2b7pa2, d2b7pb2, d2b7pc2
        automated match to d1qapa2
        complexed with pht, so4
      2. 2168986Domain d2b7pb1: 2b7p B:1-102 [203569]
        Other proteins in same PDB: d2b7pa2, d2b7pb2, d2b7pc2
        automated match to d1qapa2
        complexed with pht, so4
      3. 2168987Domain d2b7pc1: 2b7p C:1-102 [203571]
        Other proteins in same PDB: d2b7pa2, d2b7pb2, d2b7pc2
        automated match to d1qapa2
        complexed with pht, so4
  4. 2168988Thermus thermophilus HB8 [TaxId:300852] [225062] (1 PDB entry)
  5. 2168992Vibrio cholerae [TaxId:243277] [226020] (2 PDB entries)
    1. Domains for 3paj:
      1. 2168995Domain d3paja1: 3paj A:1-128 [214736]
        Other proteins in same PDB: d3paja2, d3paja3, d3pajb2, d3pajb3
        automated match to d1qapa2
        complexed with mg
      2. 2168996Domain d3pajb1: 3paj B:1-128 [214738]
        Other proteins in same PDB: d3paja2, d3paja3, d3pajb2, d3pajb3
        automated match to d1qapa2
        complexed with mg
    2. Domains for 4hl7:
      1. 2168993Domain d4hl7a1: 4hl7 A:4-150 [262707]
        Other proteins in same PDB: d4hl7a2, d4hl7a3, d4hl7b2, d4hl7b3
        automated match to d4hl7b1
        complexed with so4
      2. 2168994Domain d4hl7b1: 4hl7 B:4-150 [252461]
        Other proteins in same PDB: d4hl7a2, d4hl7a3, d4hl7b2, d4hl7b3
        automated match to d3os4a1
        complexed with so4
  6. 2168997Yersinia pestis [TaxId:214092] [225972] (1 PDB entry)
  7. 2285555Streptococcus pyogenes [TaxId:1115816] [328856] (1 PDB entry)
  8. 2285560Streptococcus pyogenes [TaxId:471876] [328861] (1 PDB entry)

More info for Protein automated matches from d.41.2.0: automated matches

Timeline for Protein automated matches from d.41.2.0: automated matches: