Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2512852Fold d.41: alpha/beta-Hammerhead [54664] (5 superfamilies)
    core: beta-BETA-alpha-beta-BETA-beta-alpha; contains a beta-hammerhead motif similar to that in barrel-sandwich hybrids
  4. 2512972Superfamily d.41.2: Nicotinate/Quinolinate PRTase N-terminal domain-like [54675] (3 families) (S)
  5. 2513044Family d.41.2.0: automated matches [227168] (1 protein)
    not a true family
  6. 2513045Protein automated matches [226878] (8 species)
    not a true protein

Species:

  1. 2513046Ehrlichia chaffeensis [TaxId:205920] [225805] (1 PDB entry)
  2. 2513051Francisella tularensis [TaxId:177416] [226221] (1 PDB entry)
  3. 2513054Helicobacter pylori [TaxId:210] [225050] (2 PDB entries)
    1. Domains for 2b7n:
      1. 2513055Domain d2b7na1: 2b7n A:1-102 [203561]
        Other proteins in same PDB: d2b7na2, d2b7nb2, d2b7nc2
        automated match to d1qapa2
        complexed with ntm, so4
      2. 2513056Domain d2b7nb1: 2b7n B:1-102 [203563]
        Other proteins in same PDB: d2b7na2, d2b7nb2, d2b7nc2
        automated match to d1qapa2
        complexed with ntm, so4
      3. 2513057Domain d2b7nc1: 2b7n C:1-102 [203565]
        Other proteins in same PDB: d2b7na2, d2b7nb2, d2b7nc2
        automated match to d1qapa2
        complexed with ntm, so4
    2. Domains for 2b7p:
      1. 2513058Domain d2b7pa1: 2b7p A:1-102 [203567]
        Other proteins in same PDB: d2b7pa2, d2b7pb2, d2b7pc2
        automated match to d1qapa2
        complexed with pht, so4
      2. 2513059Domain d2b7pb1: 2b7p B:1-102 [203569]
        Other proteins in same PDB: d2b7pa2, d2b7pb2, d2b7pc2
        automated match to d1qapa2
        complexed with pht, so4
      3. 2513060Domain d2b7pc1: 2b7p C:1-102 [203571]
        Other proteins in same PDB: d2b7pa2, d2b7pb2, d2b7pc2
        automated match to d1qapa2
        complexed with pht, so4
  4. 2513061Streptococcus pyogenes [TaxId:1115816] [328856] (1 PDB entry)
  5. 2513068Streptococcus pyogenes [TaxId:471876] [328861] (1 PDB entry)
  6. 2513073Thermus thermophilus HB8 [TaxId:300852] [225062] (1 PDB entry)
  7. 2513077Vibrio cholerae [TaxId:243277] [226020] (2 PDB entries)
    1. Domains for 3paj:
      1. 2513080Domain d3paja1: 3paj A:1-128 [214736]
        Other proteins in same PDB: d3paja2, d3paja3, d3pajb2, d3pajb3
        automated match to d1qapa2
        complexed with mg
      2. 2513081Domain d3pajb1: 3paj B:1-128 [214738]
        Other proteins in same PDB: d3paja2, d3paja3, d3pajb2, d3pajb3
        automated match to d1qapa2
        complexed with mg
    2. Domains for 4hl7:
      1. 2513078Domain d4hl7a1: 4hl7 A:4-150 [262707]
        Other proteins in same PDB: d4hl7a2, d4hl7a3, d4hl7b2, d4hl7b3
        automated match to d4hl7b1
        complexed with so4
      2. 2513079Domain d4hl7b1: 4hl7 B:4-150 [252461]
        Other proteins in same PDB: d4hl7a2, d4hl7a3, d4hl7b2, d4hl7b3
        automated match to d3os4a1
        complexed with so4
  8. 2513082Yersinia pestis [TaxId:214092] [225972] (1 PDB entry)

More info for Protein automated matches from d.41.2.0: automated matches

Timeline for Protein automated matches from d.41.2.0: automated matches: