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Lineage for Protein: automated matches

  1. Root: SCOPe 2.06
  2. 2017114Class b: All beta proteins [48724] (177 folds)
  3. 2036241Fold b.6: Cupredoxin-like [49502] (2 superfamilies)
    sandwich; 7 strands in 2 sheets, greek-key
    variations: some members have additional 1-2 strands
  4. 2036242Superfamily b.6.1: Cupredoxins [49503] (8 families) (S)
    contains copper-binding site
  5. 2036937Family b.6.1.3: Multidomain cupredoxins [49550] (8 protein domains)
  6. 2037552Protein automated matches [226877] (4 species)
    not a true protein

Species:

  1. 2037553Achromobacter cycloclastes [TaxId:223] [274677] (1 PDB entry)
  2. 2037555Achromobacter xylosoxidans [TaxId:85698] [225099] (11 PDB entries)
    1. Domains for 2bo0:
      1. 2037556Domain d2bo0a1: 2bo0 A:1-159 [128867]
        automated match to d1gs7a1
        complexed with pg4, zn; mutant
      2. 2037557Domain d2bo0a2: 2bo0 A:160-336 [128868]
        automated match to d1oe1a2
        complexed with pg4, zn; mutant
    2. Domains for 2bp0:
      1. 2037578Domain d2bp0a1: 2bp0 A:2-159 [203619]
        automated match to d1gs7a1
        complexed with cu, so4, zn; mutant
      2. 2037579Domain d2bp0a2: 2bp0 A:160-336 [203620]
        automated match to d1oe1a2
        complexed with cu, so4, zn; mutant
      3. 2037580Domain d2bp0b1: 2bp0 B:2-159 [203621]
        automated match to d1gs7a1
        complexed with cu, so4, zn; mutant
      4. 2037581Domain d2bp0b2: 2bp0 B:160-336 [203622]
        automated match to d1oe1a2
        complexed with cu, so4, zn; mutant
    3. Domains for 2bp8:
      1. 2037574Domain d2bp8a1: 2bp8 A:2-159 [203623]
        automated match to d1gs7a1
        complexed with cu, so4, zn
      2. 2037575Domain d2bp8a2: 2bp8 A:160-336 [203624]
        automated match to d1oe1a2
        complexed with cu, so4, zn
      3. 2037576Domain d2bp8b1: 2bp8 B:2-159 [203625]
        automated match to d1gs7a1
        complexed with cu, so4, zn
      4. 2037577Domain d2bp8b2: 2bp8 B:160-336 [203626]
        automated match to d1oe1a2
        complexed with cu, so4, zn
    4. Domains for 2jfc:
      1. 2037588Domain d2jfca1: 2jfc A:2-159 [138291]
        automated match to d1gs7a1
        complexed with cl, cu; mutant
      2. 2037589Domain d2jfca2: 2jfc A:160-336 [138292]
        automated match to d1oe1a2
        complexed with cl, cu; mutant
      3. 2037590Domain d2jfcb1: 2jfc B:2-159 [138293]
        automated match to d1gs7a1
        complexed with cl, cu; mutant
      4. 2037591Domain d2jfcb2: 2jfc B:160-336 [138294]
        automated match to d1oe1a2
        complexed with cl, cu; mutant
      5. 2037592Domain d2jfcc1: 2jfc C:2-159 [138295]
        automated match to d1gs7a1
        complexed with cl, cu; mutant
      6. 2037593Domain d2jfcc2: 2jfc C:160-336 [138296]
        automated match to d1oe1a2
        complexed with cl, cu; mutant
      7. 2037594Domain d2jfcd1: 2jfc D:2-159 [138297]
        automated match to d1gs7a1
        complexed with cl, cu; mutant
      8. 2037595Domain d2jfcd2: 2jfc D:160-336 [138298]
        automated match to d1oe1a2
        complexed with cl, cu; mutant
      9. 2037596Domain d2jfce1: 2jfc E:2-159 [138299]
        automated match to d1gs7a1
        complexed with cl, cu; mutant
      10. 2037597Domain d2jfce2: 2jfc E:160-336 [138300]
        automated match to d1oe1a2
        complexed with cl, cu; mutant
      11. 2037598Domain d2jfcf1: 2jfc F:2-159 [138301]
        automated match to d1gs7a1
        complexed with cl, cu; mutant
      12. 2037599Domain d2jfcf2: 2jfc F:160-336 [138302]
        automated match to d1oe1a2
        complexed with cl, cu; mutant
    5. Domains for 2jl0:
      1. 2037570Domain d2jl0a1: 2jl0 A:1-159 [304135]
        automated match to d1gs7a1
        complexed with cu, mes, pg4, zn; mutant
      2. 2037571Domain d2jl0a2: 2jl0 A:160-336 [304136]
        automated match to d1oe1a2
        complexed with cu, mes, pg4, zn; mutant
      3. 2037572Domain d2jl0c1: 2jl0 C:1-159 [304137]
        automated match to d1gs7a1
        complexed with cu, mes, pg4, zn; mutant
      4. 2037573Domain d2jl0c2: 2jl0 C:160-336 [304138]
        automated match to d1oe1a2
        complexed with cu, mes, pg4, zn; mutant
    6. Domains for 2xx0:
      1. 2037558Domain d2xx0a1: 2xx0 A:2-159 [207384]
        Other proteins in same PDB: d2xx0b3
        automated match to d1gs7a1
        complexed with cu, mes, pg4, zn; mutant
      2. 2037559Domain d2xx0a2: 2xx0 A:160-336 [207385]
        Other proteins in same PDB: d2xx0b3
        automated match to d1oe1a2
        complexed with cu, mes, pg4, zn; mutant
      3. 2037560Domain d2xx0b1: 2xx0 B:2-159 [207386]
        Other proteins in same PDB: d2xx0b3
        automated match to d1gs7a1
        complexed with cu, mes, pg4, zn; mutant
      4. 2037561Domain d2xx0b2: 2xx0 B:160-336 [207387]
        Other proteins in same PDB: d2xx0b3
        automated match to d1oe1a2
        complexed with cu, mes, pg4, zn; mutant
    7. Domains for 2xx1:
      1. 2037600Domain d2xx1a1: 2xx1 A:2-159 [244601]
        automated match to d1gs7a1
        complexed with cu, no2, so4; mutant
      2. 2037601Domain d2xx1a2: 2xx1 A:160-336 [244602]
        automated match to d1oe1a2
        complexed with cu, no2, so4; mutant
      3. 2037602Domain d2xx1b1: 2xx1 B:2-159 [244603]
        automated match to d1gs7a1
        complexed with cu, no2, so4; mutant
      4. 2037603Domain d2xx1b2: 2xx1 B:160-336 [244604]
        automated match to d1oe1a2
        complexed with cu, no2, so4; mutant
      5. 2037604Domain d2xx1c1: 2xx1 C:2-159 [244605]
        automated match to d1gs7a1
        complexed with cu, no2, so4; mutant
      6. 2037605Domain d2xx1c2: 2xx1 C:160-335 [244606]
        automated match to d1oe1a2
        complexed with cu, no2, so4; mutant
      7. 2037606Domain d2xx1d1: 2xx1 D:2-159 [244607]
        automated match to d1gs7a1
        complexed with cu, no2, so4; mutant
      8. 2037607Domain d2xx1d2: 2xx1 D:160-336 [244608]
        automated match to d1oe1a2
        complexed with cu, no2, so4; mutant
      9. 2037608Domain d2xx1e1: 2xx1 E:2-159 [244609]
        automated match to d1gs7a1
        complexed with cu, no2, so4; mutant
      10. 2037609Domain d2xx1e2: 2xx1 E:160-336 [244610]
        automated match to d1oe1a2
        complexed with cu, no2, so4; mutant
      11. 2037610Domain d2xx1f1: 2xx1 F:2-159 [244611]
        automated match to d1gs7a1
        complexed with cu, no2, so4; mutant
      12. 2037611Domain d2xx1f2: 2xx1 F:160-336 [244612]
        automated match to d1oe1a2
        complexed with cu, no2, so4; mutant
    8. Domains for 2xxf:
      1. 2037562Domain d2xxfa1: 2xxf A:2-159 [207400]
        automated match to d1gs7a1
        complexed with cu, mes, peg, pg4, zn; mutant
      2. 2037563Domain d2xxfa2: 2xxf A:160-336 [207401]
        automated match to d1oe1a2
        complexed with cu, mes, peg, pg4, zn; mutant
      3. 2037564Domain d2xxfb1: 2xxf B:2-159 [207402]
        automated match to d1gs7a1
        complexed with cu, mes, peg, pg4, zn; mutant
      4. 2037565Domain d2xxfb2: 2xxf B:160-336 [207403]
        automated match to d1oe1a2
        complexed with cu, mes, peg, pg4, zn; mutant
    9. Domains for 2xxg:
      1. 2037566Domain d2xxga1: 2xxg A:2-159 [207404]
        automated match to d1gs7a1
        complexed with cu, mes, peg, pg4, zn; mutant
      2. 2037567Domain d2xxga2: 2xxg A:160-336 [207405]
        automated match to d1oe1a2
        complexed with cu, mes, peg, pg4, zn; mutant
      3. 2037568Domain d2xxgc1: 2xxg C:2-159 [207406]
        automated match to d1gs7a1
        complexed with cu, mes, peg, pg4, zn; mutant
      4. 2037569Domain d2xxgc2: 2xxg C:160-336 [207407]
        automated match to d1oe1a2
        complexed with cu, mes, peg, pg4, zn; mutant
    10. Domains for 4csp:
      1. 2037582Domain d4cspa1: 4csp A:2-159 [257749]
        automated match to d1gs7a1
        complexed with cu, mes, zn; mutant
      2. 2037583Domain d4cspa2: 4csp A:160-336 [257751]
        automated match to d1oe1a2
        complexed with cu, mes, zn; mutant
      3. 2037584Domain d4cspf1: 4csp F:2-159 [257750]
        automated match to d1gs7a1
        complexed with cu, mes, zn; mutant
      4. 2037585Domain d4cspf2: 4csp F:160-336 [257752]
        automated match to d1oe1a2
        complexed with cu, mes, zn; mutant
    11. Domains for 4csz:
      1. 2037586Domain d4csza1: 4csz A:2-159 [266078]
        automated match to d1gs7a1
        complexed with cu, no2, peg, zn; mutant
      2. 2037587Domain d4csza2: 4csz A:160-336 [266079]
        automated match to d1oe1a2
        complexed with cu, no2, peg, zn; mutant
  3. 2037612Alcaligenes xylosoxydans [TaxId:85698] [225578] (4 PDB entries)
    1. Domains for 2vmj:
      1. 2037615Domain d2vmja1: 2vmj A:2-151 [206379]
        automated match to d1gs7a1
        complexed with epe, zn; mutant
      2. 2037616Domain d2vmja2: 2vmj A:152-327 [206380]
        automated match to d1oe1a2
        complexed with epe, zn; mutant
    2. Domains for 2vn3:
      1. 2037613Domain d2vn3a1: 2vn3 A:1-159 [206381]
        automated match to d1gs7a1
        complexed with cu, so4, zn
      2. 2037614Domain d2vn3a2: 2vn3 A:160-336 [206382]
        automated match to d1oe1a2
        complexed with cu, so4, zn
    3. Domains for 5b1j:
      1. 2283081Domain d5b1ja1: 5b1j A:2-159 [326382]
        Other proteins in same PDB: d5b1jc_
        automated match to d1gs7a1
        complexed with cu
      2. 2283082Domain d5b1ja2: 5b1j A:160-335 [326383]
        Other proteins in same PDB: d5b1jc_
        automated match to d1oe1a2
        complexed with cu
      3. 2283085Domain d5b1jb1: 5b1j B:2-159 [326386]
        Other proteins in same PDB: d5b1jc_
        automated match to d1gs7a1
        complexed with cu
      4. 2283086Domain d5b1jb2: 5b1j B:160-335 [326387]
        Other proteins in same PDB: d5b1jc_
        automated match to d1oe1a2
        complexed with cu
    4. Domains for 5b1k:
      1. 2283079Domain d5b1ka1: 5b1k A:2-159 [326380]
        automated match to d1gs7a1
        complexed with cl, cu, pg4
      2. 2283080Domain d5b1ka2: 5b1k A:160-335 [326381]
        automated match to d1oe1a2
        complexed with cl, cu, pg4
  4. 2285996Neisseria gonorrhoeae [TaxId:242231] [329297] (2 PDB entries)
    1. Domains for 5tb7:
      1. 2285997Domain d5tb7c2: 5tb7 C:204-363 [329298]
        Other proteins in same PDB: d5tb7a1, d5tb7b1, d5tb7c1
        automated match to d1kbva2
        complexed with cu, po4
      2. 2285999Domain d5tb7b2: 5tb7 B:204-363 [329300]
        Other proteins in same PDB: d5tb7a1, d5tb7b1, d5tb7c1
        automated match to d1kbva2
        complexed with cu, po4
      3. 2286003Domain d5tb7a2: 5tb7 A:204-363 [329304]
        Other proteins in same PDB: d5tb7a1, d5tb7b1, d5tb7c1
        automated match to d1kbva2
        complexed with cu, po4
    2. Domains for 5ue6:
      1. 2286035Domain d5ue6a2: 5ue6 A:204-362 [329336]
        Other proteins in same PDB: d5ue6a1, d5ue6b1, d5ue6c1, d5ue6d1, d5ue6e1, d5ue6f1, d5ue6g1, d5ue6h1, d5ue6i1
        automated match to d1kbva2
        complexed with cu, na
      2. 2286042Domain d5ue6i2: 5ue6 I:204-363 [329343]
        Other proteins in same PDB: d5ue6a1, d5ue6b1, d5ue6c1, d5ue6d1, d5ue6e1, d5ue6f1, d5ue6g1, d5ue6h1, d5ue6i1
        automated match to d1kbva2
        complexed with cu, na
      3. 2286051Domain d5ue6c2: 5ue6 C:204-362 [329352]
        Other proteins in same PDB: d5ue6a1, d5ue6b1, d5ue6c1, d5ue6d1, d5ue6e1, d5ue6f1, d5ue6g1, d5ue6h1, d5ue6i1
        automated match to d1kbva2
        complexed with cu, na
      4. 2286053Domain d5ue6h2: 5ue6 H:204-362 [329354]
        Other proteins in same PDB: d5ue6a1, d5ue6b1, d5ue6c1, d5ue6d1, d5ue6e1, d5ue6f1, d5ue6g1, d5ue6h1, d5ue6i1
        automated match to d1kbva2
        complexed with cu, na
      5. 2286063Domain d5ue6d2: 5ue6 D:204-362 [329364]
        Other proteins in same PDB: d5ue6a1, d5ue6b1, d5ue6c1, d5ue6d1, d5ue6e1, d5ue6f1, d5ue6g1, d5ue6h1, d5ue6i1
        automated match to d1kbva2
        complexed with cu, na
      6. 2286065Domain d5ue6e2: 5ue6 E:204-362 [329366]
        Other proteins in same PDB: d5ue6a1, d5ue6b1, d5ue6c1, d5ue6d1, d5ue6e1, d5ue6f1, d5ue6g1, d5ue6h1, d5ue6i1
        automated match to d1kbva2
        complexed with cu, na
      7. 2286076Domain d5ue6b2: 5ue6 B:204-362 [329377]
        Other proteins in same PDB: d5ue6a1, d5ue6b1, d5ue6c1, d5ue6d1, d5ue6e1, d5ue6f1, d5ue6g1, d5ue6h1, d5ue6i1
        automated match to d1kbva2
        complexed with cu, na
      8. 2286080Domain d5ue6g2: 5ue6 G:204-362 [329381]
        Other proteins in same PDB: d5ue6a1, d5ue6b1, d5ue6c1, d5ue6d1, d5ue6e1, d5ue6f1, d5ue6g1, d5ue6h1, d5ue6i1
        automated match to d1kbva2
        complexed with cu, na
      9. 2286082Domain d5ue6f2: 5ue6 F:204-359 [329383]
        Other proteins in same PDB: d5ue6a1, d5ue6b1, d5ue6c1, d5ue6d1, d5ue6e1, d5ue6f1, d5ue6g1, d5ue6h1, d5ue6i1
        automated match to d1kbva2
        complexed with cu, na

More info for Protein automated matches from b.6.1.3: Multidomain cupredoxins

Timeline for Protein automated matches from b.6.1.3: Multidomain cupredoxins: