Lineage for Protein: automated matches

  1. Root: SCOPe 2.04
  2. 1631855Class d: Alpha and beta proteins (a+b) [53931] (380 folds)
  3. 1667394Fold d.122: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase [55873] (1 superfamily)
    8-stranded mixed beta-sheet; 2 layers: alpha/beta
  4. 1667395Superfamily d.122.1: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase [55874] (5 families) (S)
  5. 1667910Family d.122.1.0: automated matches [227160] (1 protein)
    not a true family
  6. 1667911Protein automated matches [226867] (11 species)
    not a true protein

Species:

  1. 1667912Enterococcus faecalis [TaxId:226185] [226590] (9 PDB entries)
    1. Domain for 4gee:
    2. Domain for 4gfn:
    3. Domain for 4ggl:
    4. Domain for 4hxw:
    5. Domains for 4hz5:
      1. 1667921Domain d4hz5a_: 4hz5 A: [222804]
        automated match to d1kzna_
        complexed with 19y
      2. 1667922Domain d4hz5b_: 4hz5 B: [222805]
        automated match to d1kzna_
        complexed with 19y
      3. 1667923Domain d4hz5c_: 4hz5 C: [222806]
        automated match to d1kzna_
        complexed with 19y
      4. 1667924Domain d4hz5d_: 4hz5 D: [222807]
        automated match to d1kzna_
        complexed with 19y
      5. 1667925Domain d4hz5e_: 4hz5 E: [222808]
        automated match to d1kzna_
        complexed with 19y
      6. 1667926Domain d4hz5f_: 4hz5 F: [222809]
        automated match to d1kzna_
        complexed with 19y
      7. 1667927Domain d4hz5g_: 4hz5 G: [222810]
        automated match to d1kzna_
        complexed with 19y
      8. 1667928Domain d4hz5h_: 4hz5 H: [222811]
        automated match to d1kzna_
        complexed with 19y
      9. 1667929Domain d4hz5j_: 4hz5 J: [222812]
        automated match to d1kzna_
        complexed with 19y
    6. Domain for 4k4o:
    7. Domain for 4ksg:
    8. Domain for 4ksh:
    9. Domain for 4ktn:
  2. 1667930Escherichia coli K-12 [TaxId:83333] [225819] (2 PDB entries)
    1. Domains for 3fv5:
      1. 1667931Domain d3fv5a_: 3fv5 A: [210195]
        automated match to d1aj6a_
        complexed with 1eu
      2. 1667932Domain d3fv5b_: 3fv5 B: [210196]
        automated match to d1aj6a_
        complexed with 1eu
    2. Domains for 4hz0:
      1. 1667933Domain d4hz0a_: 4hz0 A: [222802]
        automated match to d1kzna_
        complexed with 1av, mg
      2. 1667934Domain d4hz0b_: 4hz0 B: [222803]
        automated match to d1kzna_
        complexed with 1av, mg
  3. 1667935Escherichia coli [TaxId:562] [225182] (1 PDB entry)
  4. 1667937Francisella tularensis [TaxId:376619] [226591] (4 PDB entries)
    1. Domains for 4hxz:
      1. 1667942Domain d4hxza1: 4hxz A:8-215 [222784]
        Other proteins in same PDB: d4hxza2
        automated match to d1s16a2
        complexed with 19y
      2. 1667943Domain d4hxzb1: 4hxz B:7-215 [222786]
        Other proteins in same PDB: d4hxza2
        automated match to d1s16a2
        complexed with 19y
    2. Domains for 4hy1:
      1. 1667940Domain d4hy1a1: 4hy1 A:7-215 [222787]
        Other proteins in same PDB: d4hy1a2
        automated match to d1s16a2
        complexed with 19x
      2. 1667941Domain d4hy1b1: 4hy1 B:8-215 [222789]
        Other proteins in same PDB: d4hy1a2
        automated match to d1s16a2
        complexed with 19x
    3. Domains for 4hym:
      1. 1667938Domain d4hyma1: 4hym A:7-215 [222795]
        Other proteins in same PDB: d4hyma2
        automated match to d1s16a2
        complexed with cjc
      2. 1667939Domain d4hymb1: 4hym B:8-215 [222797]
        Other proteins in same PDB: d4hyma2
        automated match to d1s16a2
        complexed with cjc
    4. Domains for 4kqv:
      1. 1667944Domain d4kqva1: 4kqv A:7-215 [236036]
        Other proteins in same PDB: d4kqva2
        automated match to d4hxza1
        protein/DNA complex; complexed with doo, iod
      2. 1667945Domain d4kqvb_: 4kqv B: [236038]
        Other proteins in same PDB: d4kqva2
        automated match to d4hxza1
        protein/DNA complex; complexed with doo, iod
  5. 1667946Human (Homo sapiens) [TaxId:9606] [225008] (10 PDB entries)
    1. Domains for 1zxm:
      1. 1667950Domain d1zxma1: 1zxm A:29-265 [203366]
        Other proteins in same PDB: d1zxma2, d1zxmb2
        automated match to d1pvgb2
        complexed with anp, mg
      2. 1667951Domain d1zxmb1: 1zxm B:29-265 [203368]
        Other proteins in same PDB: d1zxma2, d1zxmb2
        automated match to d1pvgb2
        complexed with anp, mg
    2. Domains for 1zxn:
      1. 1667961Domain d1zxna1: 1zxn A:29-265 [230471]
        Other proteins in same PDB: d1zxna2, d1zxnb2, d1zxnc2, d1zxnd2
        automated match to d1zxmb1
        complexed with adp, gol, mg, so4
      2. 1667962Domain d1zxnb1: 1zxn B:29-265 [230473]
        Other proteins in same PDB: d1zxna2, d1zxnb2, d1zxnc2, d1zxnd2
        automated match to d1zxmb1
        complexed with adp, gol, mg, so4
      3. 1667963Domain d1zxnc1: 1zxn C:29-265 [230475]
        Other proteins in same PDB: d1zxna2, d1zxnb2, d1zxnc2, d1zxnd2
        automated match to d1zxmb1
        complexed with adp, gol, mg, so4
      4. 1667964Domain d1zxnd1: 1zxn D:29-265 [230477]
        Other proteins in same PDB: d1zxna2, d1zxnb2, d1zxnc2, d1zxnd2
        automated match to d1zxmb1
        complexed with adp, gol, mg, so4
    3. Domains for 2e0a:
      1. 1667947Domain d2e0aa2: 2e0a A:188-386 [230684]
        Other proteins in same PDB: d2e0aa1, d2e0ab1
        automated match to d1jm6a2
        complexed with anp, mg
      2. 1667948Domain d2e0ab2: 2e0a B:188-386 [230682]
        Other proteins in same PDB: d2e0aa1, d2e0ab1
        automated match to d1jm6a2
        complexed with anp, mg
    4. Domain for 2q8f:
    5. Domain for 2q8g:
    6. Domain for 2q8h:
    7. Domains for 2zdx:
      1. 1667959Domain d2zdxa2: 2zdx A:188-385 [244909]
        Other proteins in same PDB: d2zdxa1, d2zdxb1
        automated match to d2e0ab2
        complexed with p4a
      2. 1667960Domain d2zdxb2: 2zdx B:188-396 [244911]
        Other proteins in same PDB: d2zdxa1, d2zdxb1
        automated match to d2e0ab2
        complexed with p4a
    8. Domains for 2zdy:
      1. 1667957Domain d2zdya2: 2zdy A:188-386 [244913]
        Other proteins in same PDB: d2zdya1, d2zdyb1
        automated match to d2e0ab2
        complexed with adp, epe, mg
      2. 1667958Domain d2zdyb2: 2zdy B:188-398 [244915]
        Other proteins in same PDB: d2zdya1, d2zdyb1
        automated match to d2e0ab2
        complexed with adp, epe, mg
    9. Domain for 2zkj:
    10. Domains for 3d2r:
      1. 1667954Domain d3d2ra2: 3d2r A:181-397 [245605]
        Other proteins in same PDB: d3d2ra1, d3d2rb1
        automated match to d2bu8a2
        complexed with adp, gol, mg
      2. 1667955Domain d3d2rb2: 3d2r B:181-397 [245607]
        Other proteins in same PDB: d3d2ra1, d3d2rb1
        automated match to d2bu8a2
        complexed with adp, gol, mg
  6. 1667965Mycobacterium smegmatis [TaxId:1772] [228578] (1 PDB entry)
  7. 1667970Myxococcus xanthus [TaxId:246197] [225452] (1 PDB entry)
  8. 1667973Staphylococcus aureus [TaxId:1280] [232247] (9 PDB entries)
    1. Domains for 3g75:
      1. 1667982Domain d3g75a_: 3g75 A: [232249]
        automated match to d4gfna_
        complexed with b48
      2. 1667983Domain d3g75b_: 3g75 B: [232248]
        automated match to d4gfna_
        complexed with b48
    2. Domains for 3g7b:
      1. 1667980Domain d3g7ba_: 3g7b A: [246254]
        automated match to d3g75b_
        complexed with b47
      2. 1667981Domain d3g7bb_: 3g7b B: [246255]
        automated match to d3g75b_
        complexed with b47
    3. Domains for 3ttz:
      1. 1667976Domain d3ttza_: 3ttz A: [233741]
        automated match to d4gfna_
        complexed with 07n, mg
      2. 1667977Domain d3ttzb_: 3ttz B: [239831]
        automated match to d3ttza_
        complexed with 07n, mg
    4. Domains for 3u2d:
      1. 1667978Domain d3u2da_: 3u2d A: [250068]
        automated match to d3ttza_
        complexed with 08b, mg
      2. 1667979Domain d3u2db_: 3u2d B: [250069]
        automated match to d3ttza_
        complexed with 08b, mg
    5. Domains for 3u2k:
      1. 1667974Domain d3u2ka_: 3u2k A: [250070]
        automated match to d3ttza_
        complexed with 087, mg
      2. 1667975Domain d3u2kb_: 3u2k B: [250071]
        automated match to d3ttza_
        complexed with 087, mg
    6. Domain for 4p8o:
    7. Domain for 4urm:
    8. Domains for 4urn:
      1. 1667985Domain d4urna_: 4urn A: [260087]
        automated match to d4hymb1
        complexed with nov
      2. 1667986Domain d4urnb_: 4urn B: [258574]
        automated match to d4hymb1
        complexed with nov
    9. Domains for 4uro:
      1. 1667987Domain d4uroa_: 4uro A: [258577]
        automated match to d4k4oa_
        complexed with nov
      2. 1667988Domain d4urob_: 4uro B: [260089]
        automated match to d4k4oa_
        complexed with nov
      3. 1667989Domain d4uroc_: 4uro C: [258579]
        automated match to d4k4oa_
        complexed with nov
      4. 1667990Domain d4urod_: 4uro D: [260088]
        automated match to d4k4oa_
        complexed with nov
  9. 1667992Staphylococcus aureus [TaxId:703339] [260729] (1 PDB entry)
  10. 1667994Streptococcus pneumoniae [TaxId:760835] [226426] (7 PDB entries)
    1. Domain for 4em7:
    2. Domain for 4emv:
    3. Domain for 4lp0:
    4. Domain for 4lpb:
    5. Domain for 4mb9:
    6. Domain for 4mbc:
    7. Domain for 4mot:
  11. 1668002Xanthomonas oryzae [TaxId:291331] [226075] (2 PDB entries)
    1. Domain for 3lnu:
    2. Domain for 3lps:

More info for Protein automated matches from d.122.1.0: automated matches

Timeline for Protein automated matches from d.122.1.0: automated matches: