Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2537076Fold d.122: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase [55873] (1 superfamily)
    8-stranded mixed beta-sheet; 2 layers: alpha/beta
  4. 2537077Superfamily d.122.1: ATPase domain of HSP90 chaperone/DNA topoisomerase II/histidine kinase [55874] (5 families) (S)
  5. 2537694Family d.122.1.0: automated matches [227160] (1 protein)
    not a true family
  6. 2537695Protein automated matches [226867] (15 species)
    not a true protein

Species:

  1. 2537696Enterococcus faecalis [TaxId:226185] [226590] (9 PDB entries)
    1. Domain for 4gee:
    2. Domain for 4gfn:
    3. Domain for 4ggl:
    4. Domain for 4hxw:
    5. Domains for 4hz5:
      1. 2537705Domain d4hz5a_: 4hz5 A: [222804]
        automated match to d1kzna_
        complexed with 19y
      2. 2537706Domain d4hz5b_: 4hz5 B: [222805]
        automated match to d1kzna_
        complexed with 19y
      3. 2537707Domain d4hz5c_: 4hz5 C: [222806]
        automated match to d1kzna_
        complexed with 19y
      4. 2537708Domain d4hz5d_: 4hz5 D: [222807]
        automated match to d1kzna_
        complexed with 19y
      5. 2537709Domain d4hz5e_: 4hz5 E: [222808]
        automated match to d1kzna_
        complexed with 19y
      6. 2537710Domain d4hz5f_: 4hz5 F: [222809]
        automated match to d1kzna_
        complexed with 19y
      7. 2537711Domain d4hz5g_: 4hz5 G: [222810]
        automated match to d1kzna_
        complexed with 19y
      8. 2537712Domain d4hz5h_: 4hz5 H: [222811]
        automated match to d1kzna_
        complexed with 19y
      9. 2537713Domain d4hz5j_: 4hz5 J: [222812]
        automated match to d1kzna_
        complexed with 19y
    6. Domain for 4k4o:
    7. Domain for 4ksg:
    8. Domain for 4ksh:
    9. Domain for 4ktn:
  2. 2537714Escherichia coli K-12 [TaxId:83333] [225819] (2 PDB entries)
    1. Domains for 3fv5:
      1. 2537715Domain d3fv5a_: 3fv5 A: [210195]
        automated match to d1aj6a_
        complexed with 1eu
      2. 2537716Domain d3fv5b_: 3fv5 B: [210196]
        automated match to d1aj6a_
        complexed with 1eu
    2. Domains for 4hz0:
      1. 2537717Domain d4hz0a_: 4hz0 A: [222802]
        automated match to d1kzna_
        complexed with 1av, mg
      2. 2537718Domain d4hz0b_: 4hz0 B: [222803]
        automated match to d1kzna_
        complexed with 1av, mg
  3. 2537719Escherichia coli [TaxId:562] [225182] (4 PDB entries)
    1. Domain for 2ior:
    2. Domain for 4prv:
    3. Domain for 4prx:
    4. Domain for 4pu9:
  4. 2537724Escherichia coli [TaxId:83333] [271298] (4 PDB entries)
    1. Domain for 4wub:
    2. Domain for 4wuc:
    3. Domain for 4wud:
    4. Domain for 4xtj:
  5. 2537729Escherichia coli [TaxId:83334] [333464] (3 PDB entries)
    1. Domain for 5mmn:
    2. Domain for 5mmo:
    3. Domain for 5mmp:
  6. 2537733Francisella tularensis [TaxId:376619] [226591] (4 PDB entries)
    1. Domains for 4hxz:
      1. 2537738Domain d4hxza1: 4hxz A:8-215 [222784]
        Other proteins in same PDB: d4hxza2, d4hxza3
        automated match to d1s16a2
        complexed with 19y
      2. 2537739Domain d4hxzb1: 4hxz B:7-215 [222786]
        Other proteins in same PDB: d4hxza2, d4hxza3
        automated match to d1s16a2
        complexed with 19y
    2. Domains for 4hy1:
      1. 2537736Domain d4hy1a1: 4hy1 A:7-215 [222787]
        Other proteins in same PDB: d4hy1a2
        automated match to d1s16a2
        complexed with 19x
      2. 2537737Domain d4hy1b1: 4hy1 B:8-215 [222789]
        Other proteins in same PDB: d4hy1a2
        automated match to d1s16a2
        complexed with 19x
    3. Domains for 4hym:
      1. 2537734Domain d4hyma1: 4hym A:7-215 [222795]
        Other proteins in same PDB: d4hyma2
        automated match to d1s16a2
        complexed with cjc
      2. 2537735Domain d4hymb1: 4hym B:8-215 [222797]
        Other proteins in same PDB: d4hyma2
        automated match to d1s16a2
        complexed with cjc
    4. Domains for 4kqv:
      1. 2537740Domain d4kqva1: 4kqv A:7-215 [236036]
        Other proteins in same PDB: d4kqva2
        automated match to d4hxza1
        protein/DNA complex; complexed with doo, iod
      2. 2537741Domain d4kqvb_: 4kqv B: [236038]
        Other proteins in same PDB: d4kqva2
        automated match to d4hxza1
        protein/DNA complex; complexed with doo, iod
  7. 2537742Human (Homo sapiens) [TaxId:9606] [225008] (12 PDB entries)
    1. Domains for 1zxm:
      1. 2537745Domain d1zxma1: 1zxm A:29-265 [203366]
        Other proteins in same PDB: d1zxma2, d1zxmb2
        automated match to d1pvgb2
        complexed with anp, mg
      2. 2537746Domain d1zxmb1: 1zxm B:29-265 [203368]
        Other proteins in same PDB: d1zxma2, d1zxmb2
        automated match to d1pvgb2
        complexed with anp, mg
    2. Domains for 1zxn:
      1. 2537760Domain d1zxna1: 1zxn A:29-265 [230471]
        Other proteins in same PDB: d1zxna2, d1zxnb2, d1zxnc2, d1zxnd2
        automated match to d1zxmb1
        complexed with adp, gol, mg, so4
      2. 2537761Domain d1zxnb1: 1zxn B:29-265 [230473]
        Other proteins in same PDB: d1zxna2, d1zxnb2, d1zxnc2, d1zxnd2
        automated match to d1zxmb1
        complexed with adp, gol, mg, so4
      3. 2537762Domain d1zxnc1: 1zxn C:29-265 [230475]
        Other proteins in same PDB: d1zxna2, d1zxnb2, d1zxnc2, d1zxnd2
        automated match to d1zxmb1
        complexed with adp, gol, mg, so4
      4. 2537763Domain d1zxnd1: 1zxn D:29-265 [230477]
        Other proteins in same PDB: d1zxna2, d1zxnb2, d1zxnc2, d1zxnd2
        automated match to d1zxmb1
        complexed with adp, gol, mg, so4
    3. Domains for 2e0a:
      1. 2537743Domain d2e0aa2: 2e0a A:188-386 [230684]
        Other proteins in same PDB: d2e0aa1, d2e0ab1
        automated match to d1jm6a2
        complexed with anp, mg
      2. 2537744Domain d2e0ab2: 2e0a B:188-386 [230682]
        Other proteins in same PDB: d2e0aa1, d2e0ab1
        automated match to d1jm6a2
        complexed with anp, mg
    4. Domain for 2q8f:
    5. Domain for 2q8g:
    6. Domain for 2q8h:
    7. Domains for 2zdx:
      1. 2537758Domain d2zdxa2: 2zdx A:188-385 [244909]
        Other proteins in same PDB: d2zdxa1, d2zdxb1
        automated match to d2e0ab2
        complexed with p4a
      2. 2537759Domain d2zdxb2: 2zdx B:188-396 [244911]
        Other proteins in same PDB: d2zdxa1, d2zdxb1
        automated match to d2e0ab2
        complexed with p4a
    8. Domains for 2zdy:
      1. 2537764Domain d2zdya2: 2zdy A:188-386 [244913]
        Other proteins in same PDB: d2zdya1, d2zdya3, d2zdyb1
        automated match to d2e0ab2
        complexed with adp, epe, mg
      2. 2537765Domain d2zdyb2: 2zdy B:188-398 [244915]
        Other proteins in same PDB: d2zdya1, d2zdya3, d2zdyb1
        automated match to d2e0ab2
        complexed with adp, epe, mg
    9. Domains for 2zkj:
      1. 2537748Domain d2zkja2: 2zkj A:181-397 [244950]
        Other proteins in same PDB: d2zkja1, d2zkjb1
        automated match to d2bu8a2
        complexed with adp, mg, po4
      2. 2537749Domain d2zkjb2: 2zkj B:181-395 [262243]
        Other proteins in same PDB: d2zkja1, d2zkjb1
        automated match to d2zkja2
        complexed with adp, mg, po4
    10. Domains for 3d2r:
      1. 2537750Domain d3d2ra2: 3d2r A:181-397 [245605]
        Other proteins in same PDB: d3d2ra1, d3d2rb1
        automated match to d2bu8a2
        complexed with adp, gol, mg
      2. 2537751Domain d3d2rb2: 3d2r B:181-397 [245607]
        Other proteins in same PDB: d3d2ra1, d3d2rb1
        automated match to d2bu8a2
        complexed with adp, gol, mg
    11. Domains for 5f3k:
      1. 2537752Domain d5f3ka_: 5f3k A: [313949]
        automated match to d3omub_
      2. 2537753Domain d5f3kb_: 5f3k B: [313945]
        automated match to d3omub_
    12. Domains for 5f5r:
      1. 2537754Domain d5f5ra_: 5f5r A: [313918]
        automated match to d3omub_
        complexed with anp, mg
      2. 2537755Domain d5f5rb_: 5f5r B: [314019]
        automated match to d3omub_
        complexed with anp, mg
  8. 2537766Mycobacterium smegmatis [TaxId:1772] [228578] (2 PDB entries)
    1. Domains for 4b6c:
      1. 2537767Domain d4b6ca_: 4b6c A: [307038]
        automated match to d5d7rb_
        protein/DNA complex; complexed with b5u, na
      2. 2537768Domain d4b6cb_: 4b6c B: [307039]
        automated match to d5d7rb_
        protein/DNA complex; complexed with b5u, na
    2. Domains for 4bae:
      1. 2537769Domain d4baea_: 4bae A: [234131]
        automated match to d4baed_
        complexed with ca, rwx, so4
      2. 2537770Domain d4baeb_: 4bae B: [234132]
        automated match to d4baed_
        complexed with ca, rwx, so4
      3. 2537771Domain d4baec_: 4bae C: [234133]
        automated match to d4baed_
        complexed with ca, rwx, so4
      4. 2537772Domain d4baed_: 4bae D: [228579]
        automated match to d4emva_
        complexed with ca, rwx, so4
  9. 2537773Myxococcus xanthus [TaxId:246197] [225452] (1 PDB entry)
  10. 2537776Staphylococcus aureus [TaxId:1280] [232247] (19 PDB entries)
    1. Domains for 3g75:
      1. 2537803Domain d3g75a_: 3g75 A: [232249]
        automated match to d4gfna_
        complexed with b48
      2. 2537804Domain d3g75b_: 3g75 B: [232248]
        automated match to d4gfna_
        complexed with b48
    2. Domains for 3g7b:
      1. 2537801Domain d3g7ba_: 3g7b A: [246254]
        automated match to d3g75b_
        complexed with b47
      2. 2537802Domain d3g7bb_: 3g7b B: [246255]
        automated match to d3g75b_
        complexed with b47
    3. Domains for 3ttz:
      1. 2537795Domain d3ttza_: 3ttz A: [233741]
        automated match to d4gfna_
        complexed with 07n, mg
      2. 2537796Domain d3ttzb_: 3ttz B: [239831]
        automated match to d3ttza_
        complexed with 07n, mg
    4. Domains for 3u2d:
      1. 2537799Domain d3u2da_: 3u2d A: [250068]
        automated match to d3ttza_
        complexed with 08b, mg
      2. 2537800Domain d3u2db_: 3u2d B: [250069]
        automated match to d3ttza_
        complexed with 08b, mg
    5. Domains for 3u2k:
      1. 2537797Domain d3u2ka_: 3u2k A: [250070]
        automated match to d3ttza_
        complexed with 087, mg
      2. 2537798Domain d3u2kb_: 3u2k B: [250071]
        automated match to d3ttza_
        complexed with 087, mg
    6. Domain for 4p8o:
    7. Domains for 4urm:
      1. 2537815Domain d4urma_: 4urm A: [260090]
        automated match to d4k4oa_
        complexed with xam
      2. 2537816Domain d4urmb_: 4urm B: [264000]
        automated match to d4k4oa_
        complexed with xam
      3. 2537817Domain d4urmc_: 4urm C: [264001]
        automated match to d4k4oa_
        complexed with xam
      4. 2537818Domain d4urmd_: 4urm D: [264002]
        automated match to d4k4oa_
        complexed with xam
    8. Domains for 4urn:
      1. 2537807Domain d4urna_: 4urn A: [260087]
        automated match to d4hymb1
        complexed with nov
      2. 2537808Domain d4urnb_: 4urn B: [258574]
        automated match to d4hymb1
        complexed with nov
      3. 2537809Domain d4urnc_: 4urn C: [264003]
        automated match to d4hymb1
        complexed with nov
    9. Domains for 4uro:
      1. 2537810Domain d4uroa_: 4uro A: [258577]
        automated match to d4k4oa_
        complexed with nov
      2. 2537811Domain d4urob_: 4uro B: [260089]
        automated match to d4k4oa_
        complexed with nov
      3. 2537812Domain d4uroc_: 4uro C: [258579]
        automated match to d4k4oa_
        complexed with nov
      4. 2537813Domain d4urod_: 4uro D: [260088]
        automated match to d4k4oa_
        complexed with nov
    10. Domains for 5cph:
      1. 2537777Domain d5cpha_: 5cph A: [312819]
        automated match to d3u2ka_
        protein/DNA complex; complexed with evo, mpd, so4
      2. 2537778Domain d5cphb_: 5cph B: [312831]
        automated match to d3u2ka_
        protein/DNA complex; complexed with evo, mpd, so4
    11. Domains for 5ctu:
      1. 2537779Domain d5ctua_: 5ctu A: [313370]
        Other proteins in same PDB: d5ctub2
        automated match to d3u2ka_
        protein/DNA complex; complexed with 54x, cl, mg, mpd
      2. 2537780Domain d5ctub1: 5ctu B:20-231 [344176]
        Other proteins in same PDB: d5ctub2
        automated match to d3u2ka_
        protein/DNA complex; complexed with 54x, cl, mg, mpd
    12. Domains for 5ctw:
      1. 2537781Domain d5ctwa_: 5ctw A: [314540]
        automated match to d3u2ka_
        protein/DNA complex; complexed with 55d, cl, mg, mpd
      2. 2537782Domain d5ctwb_: 5ctw B: [313395]
        automated match to d3u2ka_
        protein/DNA complex; complexed with 55d, cl, mg, mpd
    13. Domains for 5ctx:
      1. 2537791Domain d5ctxa_: 5ctx A: [313553]
        automated match to d3u2ka_
        protein/DNA complex; complexed with 55g, mg, mpd
      2. 2537792Domain d5ctxb_: 5ctx B: [313434]
        automated match to d3u2ka_
        protein/DNA complex; complexed with 55g, mg, mpd
    14. Domains for 5cty:
      1. 2537789Domain d5ctya_: 5cty A: [312930]
        automated match to d3u2ka_
        protein/DNA complex; complexed with 55h, cl, mg, mpd
      2. 2537790Domain d5ctyb_: 5cty B: [312883]
        automated match to d3u2ka_
        protein/DNA complex; complexed with 55h, cl, mg, mpd
    15. Domains for 5d6p:
      1. 2537805Domain d5d6pa_: 5d6p A: [279583]
        automated match to d3u2ka_
        protein/DNA complex; complexed with 57u, gol, mpd
      2. 2537806Domain d5d6pb_: 5d6p B: [279582]
        automated match to d3u2ka_
        protein/DNA complex; complexed with 57u, gol, mpd
    16. Domains for 5d6q:
      1. 2537783Domain d5d6qa_: 5d6q A: [279578]
        automated match to d3u2ka_
        protein/DNA complex; complexed with 57v, mg, mpd
      2. 2537784Domain d5d6qb_: 5d6q B: [279581]
        automated match to d3u2ka_
        protein/DNA complex; complexed with 57v, mg, mpd
    17. Domains for 5d7c:
      1. 2537785Domain d5d7ca_: 5d7c A: [279584]
        automated match to d3u2ka_
        protein/DNA complex; complexed with 57w, mg, mpd
      2. 2537786Domain d5d7cb_: 5d7c B: [279585]
        automated match to d3u2ka_
        protein/DNA complex; complexed with 57w, mg, mpd
    18. Domains for 5d7d:
      1. 2537793Domain d5d7da_: 5d7d A: [279259]
        automated match to d3u2ka_
        protein/DNA complex; complexed with 57x, cl, mg, mpd
      2. 2537794Domain d5d7db_: 5d7d B: [279260]
        automated match to d3u2ka_
        protein/DNA complex; complexed with 57x, cl, mg, mpd
    19. Domains for 5d7r:
      1. 2537787Domain d5d7ra_: 5d7r A: [279442]
        automated match to d3u2ka_
        protein/DNA complex; complexed with 57y, cl, mg, mpd
      2. 2537788Domain d5d7rb_: 5d7r B: [279441]
        automated match to d3u2ka_
        protein/DNA complex; complexed with 57y, cl, mg, mpd
  11. 2537819Staphylococcus aureus [TaxId:703339] [260729] (1 PDB entry)
  12. 2537821Streptococcus pneumoniae [TaxId:171101] [273854] (2 PDB entries)
    1. Domain for 5boc:
    2. Domain for 5bod:
  13. 2537824Streptococcus pneumoniae [TaxId:760835] [226426] (7 PDB entries)
    1. Domain for 4em7:
    2. Domain for 4emv:
    3. Domain for 4lp0:
    4. Domain for 4lpb:
    5. Domain for 4mb9:
    6. Domain for 4mbc:
    7. Domain for 4mot:
  14. 2537832Xanthomonas oryzae [TaxId:291331] [226075] (2 PDB entries)
    1. Domain for 3lnu:
    2. Domain for 3lps:
  15. 3057045Streptococcus pneumoniae [TaxId:760839] [357107] (1 PDB entry)

More info for Protein automated matches from d.122.1.0: automated matches

Timeline for Protein automated matches from d.122.1.0: automated matches: