Lineage for Protein: automated matches

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2321178Fold a.40: CH domain-like [47575] (3 superfamilies)
    core: 4 helices: bundle
  4. 2321179Superfamily a.40.1: Calponin-homology domain, CH-domain [47576] (2 families) (S)
  5. 2321257Family a.40.1.0: automated matches [227151] (1 protein)
    not a true family
  6. 2321258Protein automated matches [226856] (4 species)
    not a true protein

Species:

  1. 2321259Human (Homo sapiens) [TaxId:9606] [224978] (30 PDB entries)
    1. Domains for 1tjt:
      1. 2321310Domain d1tjta1: 1tjt A:42-155 [202921]
        automated match to d1sh5a1
      2. 2321311Domain d1tjta2: 1tjt A:156-265 [202922]
        automated match to d1sh5a2
    2. Domains for 1wku:
      1. 2321260Domain d1wkua1: 1wku A:42-155 [202997]
        automated match to d1sh5a1
      2. 2321261Domain d1wkua2: 1wku A:156-266 [202998]
        automated match to d1sh5a2
      3. 2321262Domain d1wkub1: 1wku B:42-155 [202999]
        automated match to d1sh5a1
      4. 2321263Domain d1wkub2: 1wku B:156-268 [203000]
        automated match to d1sh5a2
    3. Domain for 1wyl:
    4. Domain for 1wyn:
    5. Domain for 1wyp:
    6. Domain for 1wyr:
    7. Domain for 2d86:
    8. Domain for 2d87:
    9. Domain for 2d88:
    10. Domain for 2d89:
    11. Domain for 2dk9:
    12. Domain for 2e9k:
    13. Domains for 2eyi:
      1. 2321270Domain d2eyia1: 2eyi A:30-141 [204151]
        Other proteins in same PDB: d2eyia3, d2eyia4
        automated match to d1sh5a1
      2. 2321271Domain d2eyia2: 2eyi A:142-253 [204152]
        Other proteins in same PDB: d2eyia3, d2eyia4
        automated match to d1sh5a2
    14. Domains for 2eyn:
      1. 2321272Domain d2eyna1: 2eyn A:30-141 [204153]
        Other proteins in same PDB: d2eyna3, d2eyna4
        automated match to d1sh5a1
      2. 2321273Domain d2eyna2: 2eyn A:142-253 [204154]
        Other proteins in same PDB: d2eyna3, d2eyna4
        automated match to d1sh5a2
    15. Domain for 2l3g:
    16. Domains for 2r0o:
      1. 2321266Domain d2r0oa1: 2r0o A:47-160 [205920]
        Other proteins in same PDB: d2r0oa3, d2r0oa4, d2r0ob3, d2r0ob4
        automated match to d1sh5a1
        complexed with gol; mutant
      2. 2321267Domain d2r0oa2: 2r0o A:161-271 [205921]
        Other proteins in same PDB: d2r0oa3, d2r0oa4, d2r0ob3, d2r0ob4
        automated match to d1sh5a2
        complexed with gol; mutant
      3. 2321268Domain d2r0ob1: 2r0o B:47-160 [205922]
        Other proteins in same PDB: d2r0oa3, d2r0oa4, d2r0ob3, d2r0ob4
        automated match to d1sh5a1
        complexed with gol; mutant
      4. 2321269Domain d2r0ob2: 2r0o B:161-271 [205923]
        Other proteins in same PDB: d2r0oa3, d2r0oa4, d2r0ob3, d2r0ob4
        automated match to d1sh5a2
        complexed with gol; mutant
    17. Domain for 2rr8:
    18. Domains for 2wa5:
      1. 2321264Domain d2wa5a1: 2wa5 A:0-124 [206735]
        automated match to d1sh5a1
        complexed with co3, so4
      2. 2321265Domain d2wa5a2: 2wa5 A:138-242 [206736]
        automated match to d1sh5a2
        complexed with co3, so4
    19. Domains for 2wa6:
      1. 2321284Domain d2wa6a1: 2wa6 A:8-124 [206737]
        automated match to d1sh5a1
        complexed with co3; mutant
      2. 2321285Domain d2wa6a2: 2wa6 A:137-239 [206738]
        automated match to d1sh5a2
        complexed with co3; mutant
    20. Domains for 2wa7:
      1. 2321274Domain d2wa7a1: 2wa7 A:12-124 [206739]
        automated match to d1sh5a1
        complexed with cac, co3; mutant
      2. 2321275Domain d2wa7a2: 2wa7 A:137-240 [206740]
        automated match to d1sh5a2
        complexed with cac, co3; mutant
    21. Domains for 3f7p:
      1. 2321304Domain d3f7pa2: 3f7p A:181-290 [209821]
        Other proteins in same PDB: d3f7pa1, d3f7pb1, d3f7pc1, d3f7pc2, d3f7pd1, d3f7pd2
        automated match to d1sh5a2
        complexed with ca, edo, peg
      2. 2321305Domain d3f7pb2: 3f7p B:181-290 [209823]
        Other proteins in same PDB: d3f7pa1, d3f7pb1, d3f7pc1, d3f7pc2, d3f7pd1, d3f7pd2
        automated match to d1sh5a2
        complexed with ca, edo, peg
    22. Domains for 3fer:
      1. 2321286Domain d3fera1: 3fer A:23-134 [209880]
        automated match to d1sh5a1
        complexed with acy
      2. 2321287Domain d3fera2: 3fer A:148-261 [209881]
        automated match to d1sh5a2
        complexed with acy
      3. 2321288Domain d3ferb1: 3fer B:23-134 [209882]
        automated match to d1sh5a1
        complexed with acy
      4. 2321289Domain d3ferb2: 3fer B:148-261 [209883]
        automated match to d1sh5a2
        complexed with acy
      5. 2321290Domain d3ferc1: 3fer C:24-134 [209884]
        automated match to d1sh5a1
        complexed with acy
      6. 2321291Domain d3ferc2: 3fer C:148-261 [209885]
        automated match to d1sh5a2
        complexed with acy
      7. 2321292Domain d3ferd1: 3fer D:23-134 [209886]
        automated match to d1sh5a1
        complexed with acy
      8. 2321293Domain d3ferd2: 3fer D:148-261 [209887]
        automated match to d1sh5a2
        complexed with acy
    23. Domains for 3hoc:
      1. 2321312Domain d3hoca1: 3hoc A:39-151 [211167]
        automated match to d1sh5a1
        complexed with po4; mutant
      2. 2321313Domain d3hoca2: 3hoc A:166-265 [211168]
        automated match to d1sh5a2
        complexed with po4; mutant
      3. 2321314Domain d3hocb1: 3hoc B:42-151 [211169]
        automated match to d1sh5a1
        complexed with po4; mutant
      4. 2321315Domain d3hocb2: 3hoc B:166-269 [211170]
        automated match to d1sh5a2
        complexed with po4; mutant
    24. Domains for 3hop:
      1. 2321316Domain d3hopa1: 3hop A:37-151 [211174]
        automated match to d1sh5a1
        complexed with po4
      2. 2321317Domain d3hopa2: 3hop A:163-269 [211175]
        automated match to d1sh5a2
        complexed with po4
      3. 2321318Domain d3hopb1: 3hop B:39-161 [211176]
        automated match to d1sh5a1
        complexed with po4
      4. 2321319Domain d3hopb2: 3hop B:162-269 [211177]
        automated match to d1sh5a2
        complexed with po4
    25. Domains for 3hor:
      1. 2321306Domain d3hora1: 3hor A:43-151 [211178]
        automated match to d1sh5a1
        complexed with po4
      2. 2321307Domain d3hora2: 3hor A:166-264 [211179]
        automated match to d1sh5a2
        complexed with po4
      3. 2321308Domain d3horb1: 3hor B:44-151 [211180]
        automated match to d1sh5a1
        complexed with po4
      4. 2321309Domain d3horb2: 3hor B:172-269 [211181]
        automated match to d1sh5a2
        complexed with po4
    26. Domains for 4q59:
      1. 2321302Domain d4q59a2: 4q59 A:154-263 [263633]
        Other proteins in same PDB: d4q59a1, d4q59b1
        automated match to d4q59b2
      2. 2321303Domain d4q59b2: 4q59 B:154-263 [258318]
        Other proteins in same PDB: d4q59a1, d4q59b1
        automated match to d3f7pa2
    27. Domains for 5a36:
      1. 2321298Domain d5a36a1: 5a36 A:19-146 [318678]
        automated match to d2wa5a1
        mutant
      2. 2321299Domain d5a36a2: 5a36 A:147-257 [318679]
        automated match to d2wa5a2
        mutant
      3. 2321300Domain d5a36b1: 5a36 B:33-148 [318724]
        automated match to d1wkua1
        mutant
      4. 2321301Domain d5a36b2: 5a36 B:149-256 [318725]
        automated match to d1tjta2
        mutant
    28. Domains for 5a37:
      1. 2321276Domain d5a37a1: 5a37 A:34-148 [318726]
        automated match to d1wkua1
        mutant
      2. 2321277Domain d5a37a2: 5a37 A:149-257 [318727]
        automated match to d1tjta2
        mutant
      3. 2321278Domain d5a37b1: 5a37 B:35-148 [318763]
        automated match to d1wkua1
        mutant
      4. 2321279Domain d5a37b2: 5a37 B:149-257 [318764]
        automated match to d1tjta2
        mutant
    29. Domains for 5a38:
      1. 2321280Domain d5a38a1: 5a38 A:35-148 [318682]
        automated match to d1wkua1
        mutant
      2. 2321281Domain d5a38a2: 5a38 A:149-257 [318683]
        automated match to d1tjta2
        mutant
      3. 2321282Domain d5a38b1: 5a38 B:35-148 [318722]
        automated match to d1wkua1
        mutant
      4. 2321283Domain d5a38b2: 5a38 B:149-257 [318723]
        automated match to d1tjta2
        mutant
    30. Domains for 5a4b:
      1. 2321294Domain d5a4ba1: 5a4b A:35-148 [318680]
        automated match to d1wkua1
        mutant
      2. 2321295Domain d5a4ba2: 5a4b A:149-257 [318681]
        automated match to d1tjta2
        mutant
      3. 2321296Domain d5a4bb1: 5a4b B:35-148 [318751]
        automated match to d1wkua1
        mutant
      4. 2321297Domain d5a4bb2: 5a4b B:149-257 [318752]
        automated match to d1tjta2
        mutant
  2. 2321332Mouse (Mus musculus) [TaxId:10090] [255300] (3 PDB entries)
    1. Domain for 2jv9:
    2. Domain for 2k3s:
    3. Domain for 4q57:
  3. 2321336Schizosaccharomyces pombe [TaxId:284812] [312738] (1 PDB entry)
  4. 3052081Entamoeba histolytica [TaxId:5759] [352143] (1 PDB entry)

More info for Protein automated matches from a.40.1.0: automated matches

Timeline for Protein automated matches from a.40.1.0: automated matches: