SCOPe 2.06: Protein: automated matches

Lineage for Protein: automated matches

Root: SCOPe 2.06
Class b: All beta proteins [48724] (177 folds)
Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
sandwich; 7 strands in 2 sheets; greek-key
some members of the fold have additional strands
Superfamily b.1.18: E set domains [81296] (24 families)
"Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies
Family b.1.18.1: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain [81279] (8 proteins)
subgroup of the larger IPT/TIG domain family
Protein automated matches [226855] (1 species)
not a true protein

Species:

Mouse (Mus musculus) [TaxId:10090] [224977] (9 PDB entries)
1. Domain for 1zk9:
  - Domain d1zk9a1: 1zk9 A:277-378 [203338]
    Other proteins in same PDB: d1zk9a2
    automated match to d1my7a_
2. Domain for 1zka:
  - Domain d1zkaa1: 1zka A:277-378 [203339]
    Other proteins in same PDB: d1zkaa2
    automated match to d1my7a_
    mutant
3. Domain for 3jss:
  - Domain d3jssa_: 3jss A: [232639]
    automated match to d3juza_
    mutant
4. Domain for 3juz:
  - Domain d3juza_: 3juz A: [212115]
    automated match to d1my5a_
    mutant
5. Domain for 3jv0:
  - Domain d3jv0a_: 3jv0 A: [212116]
    automated match to d1my5a_
    mutant
6. Domains for 3jv4:
  1. Domain d3jv4a_: 3jv4 A: [247053]
    Other proteins in same PDB: d3jv4b_, d3jv4d_, d3jv4f_
    automated match to d1zk9a_
  2. Domain d3jv4c_: 3jv4 C: [247055]
    Other proteins in same PDB: d3jv4b_, d3jv4d_, d3jv4f_
    automated match to d1zk9a_
  3. Domain d3jv4e_: 3jv4 E: [247057]
    Other proteins in same PDB: d3jv4b_, d3jv4d_, d3jv4f_
    automated match to d1zk9a_
7. Domains for 3jv6:
  1. Domain d3jv6a_: 3jv6 A: [232642]
    automated match to d1zk9a_
    complexed with so4
  2. Domain d3jv6b_: 3jv6 B: [232643]
    automated match to d1iknc_
    complexed with so4
  3. Domain d3jv6c_: 3jv6 C: [232644]
    automated match to d1zk9a_
    complexed with so4
  4. Domain d3jv6d_: 3jv6 D: [232645]
    automated match to d1iknc_
    complexed with so4
  5. Domain d3jv6e_: 3jv6 E: [232646]
    automated match to d1zk9a_
    complexed with so4
  6. Domain d3jv6f_: 3jv6 F: [232647]
    automated match to d1iknc_
    complexed with so4
8. Domain for 4jgm:
  - Domain d4jgma1: 4jgm A:277-378 [252936]
    Other proteins in same PDB: d4jgma2
    automated match to d1zk9a_
    mutant
9. Domain for 4jhb:
  - Domain d4jhba1: 4jhb A:277-378 [227726]
    Other proteins in same PDB: d4jhba2
    automated match to d1zk9a_
    mutant

More info for Protein automated matches from b.1.18.1: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain

Timeline for Protein automated matches from b.1.18.1: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain:

Protein automated matches from b.1.18.1: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain first appeared in SCOPe 2.03
Protein automated matches from b.1.18.1: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain appears in SCOPe 2.05
Protein automated matches from b.1.18.1: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain appears in SCOPe 2.07
Protein automated matches from b.1.18.1: NF-kappa-B/REL/DORSAL transcription factors, C-terminal domain appears in the current release, SCOPe 2.08