Lineage for Protein: automated matches

  1. Root: SCOPe 2.05
  2. 1755445Class b: All beta proteins [48724] (176 folds)
  3. 1787538Fold b.40: OB-fold [50198] (16 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. 1787828Superfamily b.40.2: Bacterial enterotoxins [50203] (3 families) (S)
  5. 1788594Family b.40.2.0: automated matches [227133] (1 protein)
    not a true family
  6. 1788595Protein automated matches [226834] (5 species)
    not a true protein

Species:

  1. 1788596Staphylococcus aureus [TaxId:1280] [225054] (7 PDB entries)
    1. Domain for 1xxg:
    2. Domain for 2rdg:
    3. Domain for 2rdh:
    4. Domain for 3ea6:
    5. Domains for 3mc0:
      1. 1788600Domain d3mc0b1: 3mc0 B:1-115 [199823]
        Other proteins in same PDB: d3mc0a_, d3mc0b2, d3mc0c_, d3mc0d2
        automated match to d1d5zc1
        complexed with act
      2. 1788601Domain d3mc0d1: 3mc0 D:2-115 [199825]
        Other proteins in same PDB: d3mc0a_, d3mc0b2, d3mc0c_, d3mc0d2
        automated match to d1d5zc1
        complexed with act
    6. Domains for 3owe:
      1. 1788603Domain d3oweb1: 3owe B:1-115 [200165]
        Other proteins in same PDB: d3owea_, d3oweb2, d3owec_, d3owed2, d3owee_, d3owef2, d3oweg_, d3oweh2, d3owei_, d3owej2, d3owek_, d3owel2, d3owem_, d3owen2, d3oweo_, d3owep2
        automated match to d1d5zc1
        mutant
      2. 1788604Domain d3owed1: 3owe D:1-115 [200167]
        Other proteins in same PDB: d3owea_, d3oweb2, d3owec_, d3owed2, d3owee_, d3owef2, d3oweg_, d3oweh2, d3owei_, d3owej2, d3owek_, d3owel2, d3owem_, d3owen2, d3oweo_, d3owep2
        automated match to d1d5zc1
        mutant
      3. 1788605Domain d3owef1: 3owe F:1-115 [200169]
        Other proteins in same PDB: d3owea_, d3oweb2, d3owec_, d3owed2, d3owee_, d3owef2, d3oweg_, d3oweh2, d3owei_, d3owej2, d3owek_, d3owel2, d3owem_, d3owen2, d3oweo_, d3owep2
        automated match to d1d5zc1
        mutant
      4. 1788606Domain d3oweh1: 3owe H:1-115 [200171]
        Other proteins in same PDB: d3owea_, d3oweb2, d3owec_, d3owed2, d3owee_, d3owef2, d3oweg_, d3oweh2, d3owei_, d3owej2, d3owek_, d3owel2, d3owem_, d3owen2, d3oweo_, d3owep2
        automated match to d1d5zc1
        mutant
      5. 1788607Domain d3owej1: 3owe J:1-115 [200173]
        Other proteins in same PDB: d3owea_, d3oweb2, d3owec_, d3owed2, d3owee_, d3owef2, d3oweg_, d3oweh2, d3owei_, d3owej2, d3owek_, d3owel2, d3owem_, d3owen2, d3oweo_, d3owep2
        automated match to d1d5zc1
        mutant
      6. 1788608Domain d3owel1: 3owe L:1-115 [200175]
        Other proteins in same PDB: d3owea_, d3oweb2, d3owec_, d3owed2, d3owee_, d3owef2, d3oweg_, d3oweh2, d3owei_, d3owej2, d3owek_, d3owel2, d3owem_, d3owen2, d3oweo_, d3owep2
        automated match to d1d5zc1
        mutant
      7. 1788609Domain d3owen1: 3owe N:1-115 [200177]
        Other proteins in same PDB: d3owea_, d3oweb2, d3owec_, d3owed2, d3owee_, d3owef2, d3oweg_, d3oweh2, d3owei_, d3owej2, d3owek_, d3owel2, d3owem_, d3owen2, d3oweo_, d3owep2
        automated match to d1d5zc1
        mutant
      8. 1788610Domain d3owep1: 3owe P:1-115 [200179]
        Other proteins in same PDB: d3owea_, d3oweb2, d3owec_, d3owed2, d3owee_, d3owef2, d3oweg_, d3oweh2, d3owei_, d3owej2, d3owek_, d3owel2, d3owem_, d3owen2, d3oweo_, d3owep2
        automated match to d1d5zc1
        mutant
    7. Domain for 4udu:
  2. 1788612Staphylococcus aureus [TaxId:158878] [224865] (2 PDB entries)
    1. Domains for 2rdh:
      1. 1788613Domain d2rdhb1: 2rdh B:6-93 [231257]
        Other proteins in same PDB: d2rdha2, d2rdhb2, d2rdhc2, d2rdhd2
        automated match to d3o13a1
        complexed with na, po4
      2. 1788614Domain d2rdhc1: 2rdh C:5-93 [231259]
        Other proteins in same PDB: d2rdha2, d2rdhb2, d2rdhc2, d2rdhd2
        automated match to d3o13a1
        complexed with na, po4
      3. 1788615Domain d2rdhd1: 2rdh D:6-93 [231261]
        Other proteins in same PDB: d2rdha2, d2rdhb2, d2rdhc2, d2rdhd2
        automated match to d3o13a1
        complexed with na, po4
    2. Domain for 3o13:
  3. 1788617Staphylococcus aureus [TaxId:426430] [267923] (1 PDB entry)
  4. 1788619Staphylococcus aureus [TaxId:93061] [226094] (6 PDB entries)
    1. Domains for 3r2t:
      1. 1788626Domain d3r2ta1: 3r2t A:38-128 [215557]
        Other proteins in same PDB: d3r2ta2, d3r2tb2
        automated match to d1m4va1
        complexed with so4
      2. 1788627Domain d3r2tb1: 3r2t B:39-128 [215559]
        Other proteins in same PDB: d3r2ta2, d3r2tb2
        automated match to d1m4va1
        complexed with so4
    2. Domains for 3ury:
      1. 1788620Domain d3urya1: 3ury A:116-207 [265538]
        Other proteins in same PDB: d3urya2, d3uryb2
        automated match to d4rcob1
        complexed with cl
      2. 1788621Domain d3uryb1: 3ury B:116-207 [265540]
        Other proteins in same PDB: d3urya2, d3uryb2
        automated match to d4rcob1
        complexed with cl
    3. Domains for 4dxf:
      1. 1788622Domain d4dxfa1: 4dxf A:7-99 [266160]
        Other proteins in same PDB: d4dxfa2, d4dxfb2
        automated match to d4rcob1
        complexed with cl, gol
      2. 1788623Domain d4dxfb1: 4dxf B:11-99 [266162]
        Other proteins in same PDB: d4dxfa2, d4dxfb2
        automated match to d4rcob1
        complexed with cl, gol
    4. Domains for 4o1n:
      1. 1788630Domain d4o1na1: 4o1n A:14-101 [268436]
        Other proteins in same PDB: d4o1na2, d4o1nb2, d4o1nc2, d4o1nd2, d4o1ne2, d4o1nf2
        automated match to d1m4va1
        complexed with gol
      2. 1788631Domain d4o1nb1: 4o1n B:14-101 [268438]
        Other proteins in same PDB: d4o1na2, d4o1nb2, d4o1nc2, d4o1nd2, d4o1ne2, d4o1nf2
        automated match to d1m4va1
        complexed with gol
      3. 1788632Domain d4o1nc1: 4o1n C:14-101 [268431]
        Other proteins in same PDB: d4o1na2, d4o1nb2, d4o1nc2, d4o1nd2, d4o1ne2, d4o1nf2
        automated match to d1m4va1
        complexed with gol
      4. 1788633Domain d4o1nd1: 4o1n D:13-101 [268433]
        Other proteins in same PDB: d4o1na2, d4o1nb2, d4o1nc2, d4o1nd2, d4o1ne2, d4o1nf2
        automated match to d1m4va1
        complexed with gol
      5. 1788634Domain d4o1ne1: 4o1n E:14-101 [268440]
        Other proteins in same PDB: d4o1na2, d4o1nb2, d4o1nc2, d4o1nd2, d4o1ne2, d4o1nf2
        automated match to d1m4va1
        complexed with gol
      6. 1788635Domain d4o1nf1: 4o1n F:13-101 [268443]
        Other proteins in same PDB: d4o1na2, d4o1nb2, d4o1nc2, d4o1nd2, d4o1ne2, d4o1nf2
        automated match to d1m4va1
        complexed with gol
    5. Domains for 4rco:
      1. 1788624Domain d4rcoa1: 4rco A:117-207 [263855]
        Other proteins in same PDB: d4rcoa2, d4rcob2
        automated match to d4rcob1
        complexed with cl
      2. 1788625Domain d4rcob1: 4rco B:117-207 [260017]
        Other proteins in same PDB: d4rcoa2, d4rcob2
        automated match to d2rdga1
        complexed with cl
    6. Domains for 5d3d:
      1. 1788628Domain d5d3da1: 5d3d A:137-225 [276228]
        Other proteins in same PDB: d5d3da2, d5d3db2
        automated match to d3uryb1
        complexed with cl, gol, na, scn
      2. 1788629Domain d5d3db1: 5d3d B:132-225 [276226]
        Other proteins in same PDB: d5d3da2, d5d3db2
        automated match to d3uryb1
        complexed with cl, gol, na, scn
  5. 1788636Staphylococcus aureus [TaxId:93062] [225286] (3 PDB entries)
    1. Domain for 2nts:
    2. Domains for 2ntt:
      1. 1788637Domain d2ntta1: 2ntt A:1-86 [205178]
        Other proteins in same PDB: d2ntta2, d2nttb2
        automated match to d2g9hd1
        complexed with cl, edo
      2. 1788638Domain d2nttb1: 2ntt B:1-86 [205180]
        Other proteins in same PDB: d2ntta2, d2nttb2
        automated match to d2g9hd1
        complexed with cl, edo
    3. Domain for 3r2i:

More info for Protein automated matches from b.40.2.0: automated matches

Timeline for Protein automated matches from b.40.2.0: automated matches: