Lineage for Species: Norway rat (Rattus norvegicus) [TaxId: 10116]

  1. Root: SCOPe 2.06
  2. 2170735Class d: Alpha and beta proteins (a+b) [53931] (385 folds)
  3. 2232528Fold d.162: LDH C-terminal domain-like [56326] (1 superfamily)
    unusual fold, defines family
  4. 2232529Superfamily d.162.1: LDH C-terminal domain-like [56327] (3 families) (S)
  5. 2232530Family d.162.1.1: Lactate & malate dehydrogenases, C-terminal domain [56328] (5 proteins)
    N-terminal domain is NAD-binding module (alpha/beta Rossmann-fold domain)
    automatically mapped to Pfam PF02866
  6. 2232895Protein automated matches [226882] (7 species)
    not a true protein
  7. 2232961Species Norway rat (Rattus norvegicus) [TaxId:10116] [226330] (13 PDB entries)

PDB entries in Species: Norway rat (Rattus norvegicus) [TaxId: 10116]:

  1. Domain(s) for 4aj1:
    1. 2232986Domain d4aj1a2: 4aj1 A:160-331 [218909]
      Other proteins in same PDB: d4aj1a1, d4aj1b1, d4aj1c1, d4aj1d1
      automated match to d9ldta2
      complexed with aj1, gol, mli, oxm
    2. 2232987Domain d4aj1b2: 4aj1 B:160-331 [218911]
      Other proteins in same PDB: d4aj1a1, d4aj1b1, d4aj1c1, d4aj1d1
      automated match to d9ldta2
      complexed with aj1, gol, mli, oxm
    3. 2232988Domain d4aj1c2: 4aj1 C:160-331 [218913]
      Other proteins in same PDB: d4aj1a1, d4aj1b1, d4aj1c1, d4aj1d1
      automated match to d9ldta2
      complexed with aj1, gol, mli, oxm
    4. 2232989Domain d4aj1d2: 4aj1 D:160-331 [218915]
      Other proteins in same PDB: d4aj1a1, d4aj1b1, d4aj1c1, d4aj1d1
      automated match to d9ldta2
      complexed with aj1, gol, mli, oxm
  2. Domain(s) for 4aj2:
    1. 2232970Domain d4aj2a2: 4aj2 A:160-331 [218917]
      Other proteins in same PDB: d4aj2a1, d4aj2b1, d4aj2c1, d4aj2d1
      automated match to d9ldta2
      complexed with 52c, gol, mli
    2. 2232971Domain d4aj2b2: 4aj2 B:160-331 [218919]
      Other proteins in same PDB: d4aj2a1, d4aj2b1, d4aj2c1, d4aj2d1
      automated match to d9ldta2
      complexed with 52c, gol, mli
    3. 2232972Domain d4aj2c2: 4aj2 C:160-331 [218921]
      Other proteins in same PDB: d4aj2a1, d4aj2b1, d4aj2c1, d4aj2d1
      automated match to d9ldta2
      complexed with 52c, gol, mli
    4. 2232973Domain d4aj2d2: 4aj2 D:160-331 [218923]
      Other proteins in same PDB: d4aj2a1, d4aj2b1, d4aj2c1, d4aj2d1
      automated match to d9ldta2
      complexed with 52c, gol, mli
  3. Domain(s) for 4aj4:
    1. 2232998Domain d4aj4a2: 4aj4 A:160-331 [218925]
      Other proteins in same PDB: d4aj4a1, d4aj4b1, d4aj4c1, d4aj4d1
      automated match to d9ldta2
      complexed with mli, vab
    2. 2232999Domain d4aj4b2: 4aj4 B:160-331 [218927]
      Other proteins in same PDB: d4aj4a1, d4aj4b1, d4aj4c1, d4aj4d1
      automated match to d9ldta2
      complexed with mli, vab
    3. 2233000Domain d4aj4c2: 4aj4 C:160-331 [218929]
      Other proteins in same PDB: d4aj4a1, d4aj4b1, d4aj4c1, d4aj4d1
      automated match to d9ldta2
      complexed with mli, vab
    4. 2233001Domain d4aj4d2: 4aj4 D:160-331 [218931]
      Other proteins in same PDB: d4aj4a1, d4aj4b1, d4aj4c1, d4aj4d1
      automated match to d9ldta2
      complexed with mli, vab
  4. Domain(s) for 4aje:
    1. 2233006Domain d4ajea2: 4aje A:160-331 [218934]
      Other proteins in same PDB: d4ajea1, d4ajeb1, d4ajec1, d4ajed1
      automated match to d9ldta2
      complexed with 2b4, gol, mli
    2. 2233007Domain d4ajeb2: 4aje B:160-331 [218936]
      Other proteins in same PDB: d4ajea1, d4ajeb1, d4ajec1, d4ajed1
      automated match to d9ldta2
      complexed with 2b4, gol, mli
    3. 2233008Domain d4ajec2: 4aje C:160-331 [218938]
      Other proteins in same PDB: d4ajea1, d4ajeb1, d4ajec1, d4ajed1
      automated match to d9ldta2
      complexed with 2b4, gol, mli
    4. 2233009Domain d4ajed2: 4aje D:160-331 [218940]
      Other proteins in same PDB: d4ajea1, d4ajeb1, d4ajec1, d4ajed1
      automated match to d9ldta2
      complexed with 2b4, gol, mli
  5. Domain(s) for 4ajh:
    1. 2232978Domain d4ajha2: 4ajh A:160-331 [218942]
      Other proteins in same PDB: d4ajha1, d4ajhb1, d4ajhc1, d4ajhd1
      automated match to d9ldta2
      complexed with 2b4, 88s, gol, mli
    2. 2232979Domain d4ajhb2: 4ajh B:160-331 [218944]
      Other proteins in same PDB: d4ajha1, d4ajhb1, d4ajhc1, d4ajhd1
      automated match to d9ldta2
      complexed with 2b4, 88s, gol, mli
    3. 2232980Domain d4ajhc2: 4ajh C:160-331 [218946]
      Other proteins in same PDB: d4ajha1, d4ajhb1, d4ajhc1, d4ajhd1
      automated match to d9ldta2
      complexed with 2b4, 88s, gol, mli
    4. 2232981Domain d4ajhd2: 4ajh D:160-331 [218948]
      Other proteins in same PDB: d4ajha1, d4ajhb1, d4ajhc1, d4ajhd1
      automated match to d9ldta2
      complexed with 2b4, 88s, gol, mli
  6. Domain(s) for 4aji:
    1. 2232990Domain d4ajia2: 4aji A:160-331 [218950]
      Other proteins in same PDB: d4ajia1, d4ajib1, d4ajic1, d4ajid1
      automated match to d9ldta2
      complexed with 88r
    2. 2232991Domain d4ajib2: 4aji B:160-331 [218952]
      Other proteins in same PDB: d4ajia1, d4ajib1, d4ajic1, d4ajid1
      automated match to d9ldta2
      complexed with 88r
    3. 2232992Domain d4ajic2: 4aji C:160-331 [218954]
      Other proteins in same PDB: d4ajia1, d4ajib1, d4ajic1, d4ajid1
      automated match to d9ldta2
      complexed with 88r
    4. 2232993Domain d4ajid2: 4aji D:160-331 [218956]
      Other proteins in same PDB: d4ajia1, d4ajib1, d4ajic1, d4ajid1
      automated match to d9ldta2
      complexed with 88r
  7. Domain(s) for 4ajj:
    1. 2232962Domain d4ajja2: 4ajj A:160-331 [218958]
      Other proteins in same PDB: d4ajja1, d4ajjb1, d4ajjc1, d4ajjd1
      automated match to d9ldta2
      complexed with 88r, 88s, dms, gol, mli
    2. 2232963Domain d4ajjb2: 4ajj B:160-331 [218960]
      Other proteins in same PDB: d4ajja1, d4ajjb1, d4ajjc1, d4ajjd1
      automated match to d9ldta2
      complexed with 88r, 88s, dms, gol, mli
    3. 2232964Domain d4ajjc2: 4ajj C:160-331 [218962]
      Other proteins in same PDB: d4ajja1, d4ajjb1, d4ajjc1, d4ajjd1
      automated match to d9ldta2
      complexed with 88r, 88s, dms, gol, mli
    4. 2232965Domain d4ajjd2: 4ajj D:160-331 [218964]
      Other proteins in same PDB: d4ajja1, d4ajjb1, d4ajjc1, d4ajjd1
      automated match to d9ldta2
      complexed with 88r, 88s, dms, gol, mli
  8. Domain(s) for 4ajk:
    1. 2232994Domain d4ajka2: 4ajk A:160-331 [218966]
      Other proteins in same PDB: d4ajka1, d4ajkb1, d4ajkc1, d4ajkd1
      automated match to d9ldta2
      complexed with 88s, gol, mli
    2. 2232995Domain d4ajkb2: 4ajk B:160-331 [218968]
      Other proteins in same PDB: d4ajka1, d4ajkb1, d4ajkc1, d4ajkd1
      automated match to d9ldta2
      complexed with 88s, gol, mli
    3. 2232996Domain d4ajkc2: 4ajk C:160-331 [218970]
      Other proteins in same PDB: d4ajka1, d4ajkb1, d4ajkc1, d4ajkd1
      automated match to d9ldta2
      complexed with 88s, gol, mli
    4. 2232997Domain d4ajkd2: 4ajk D:160-331 [218972]
      Other proteins in same PDB: d4ajka1, d4ajkb1, d4ajkc1, d4ajkd1
      automated match to d9ldta2
      complexed with 88s, gol, mli
  9. Domain(s) for 4ajl:
    1. 2232966Domain d4ajla2: 4ajl A:160-331 [218974]
      Other proteins in same PDB: d4ajla1, d4ajlb1, d4ajlc1, d4ajld1
      automated match to d9ldta2
      complexed with 88w, dms, gol, mli
    2. 2232967Domain d4ajlb2: 4ajl B:160-331 [218976]
      Other proteins in same PDB: d4ajla1, d4ajlb1, d4ajlc1, d4ajld1
      automated match to d9ldta2
      complexed with 88w, dms, gol, mli
    3. 2232968Domain d4ajlc2: 4ajl C:160-331 [218978]
      Other proteins in same PDB: d4ajla1, d4ajlb1, d4ajlc1, d4ajld1
      automated match to d9ldta2
      complexed with 88w, dms, gol, mli
    4. 2232969Domain d4ajld2: 4ajl D:160-331 [218980]
      Other proteins in same PDB: d4ajla1, d4ajlb1, d4ajlc1, d4ajld1
      automated match to d9ldta2
      complexed with 88w, dms, gol, mli
  10. Domain(s) for 4ajn:
    1. 2233002Domain d4ajna2: 4ajn A:160-331 [218982]
      Other proteins in same PDB: d4ajna1, d4ajnb1, d4ajnc1, d4ajnd1
      automated match to d9ldta2
      complexed with 88v, gol
    2. 2233003Domain d4ajnb2: 4ajn B:160-331 [218984]
      Other proteins in same PDB: d4ajna1, d4ajnb1, d4ajnc1, d4ajnd1
      automated match to d9ldta2
      complexed with 88v, gol
    3. 2233004Domain d4ajnc2: 4ajn C:160-331 [218986]
      Other proteins in same PDB: d4ajna1, d4ajnb1, d4ajnc1, d4ajnd1
      automated match to d9ldta2
      complexed with 88v, gol
    4. 2233005Domain d4ajnd2: 4ajn D:160-331 [218988]
      Other proteins in same PDB: d4ajna1, d4ajnb1, d4ajnc1, d4ajnd1
      automated match to d9ldta2
      complexed with 88v, gol
  11. Domain(s) for 4ajo:
    1. 2232982Domain d4ajoa2: 4ajo A:160-331 [218990]
      Other proteins in same PDB: d4ajoa1, d4ajob1, d4ajoc1, d4ajod1
      automated match to d9ldta2
      complexed with 88n, dms, gol
    2. 2232983Domain d4ajob2: 4ajo B:160-331 [218992]
      Other proteins in same PDB: d4ajoa1, d4ajob1, d4ajoc1, d4ajod1
      automated match to d9ldta2
      complexed with 88n, dms, gol
    3. 2232984Domain d4ajoc2: 4ajo C:160-331 [218994]
      Other proteins in same PDB: d4ajoa1, d4ajob1, d4ajoc1, d4ajod1
      automated match to d9ldta2
      complexed with 88n, dms, gol
    4. 2232985Domain d4ajod2: 4ajo D:160-331 [218996]
      Other proteins in same PDB: d4ajoa1, d4ajob1, d4ajoc1, d4ajod1
      automated match to d9ldta2
      complexed with 88n, dms, gol
  12. Domain(s) for 4al4:
    1. 2232974Domain d4al4a2: 4al4 A:160-331 [219021]
      Other proteins in same PDB: d4al4a1, d4al4b1, d4al4c1, d4al4d1
      automated match to d9ldta2
      complexed with gol, w7e
    2. 2232975Domain d4al4b2: 4al4 B:160-331 [219023]
      Other proteins in same PDB: d4al4a1, d4al4b1, d4al4c1, d4al4d1
      automated match to d9ldta2
      complexed with gol, w7e
    3. 2232976Domain d4al4c2: 4al4 C:160-331 [219025]
      Other proteins in same PDB: d4al4a1, d4al4b1, d4al4c1, d4al4d1
      automated match to d9ldta2
      complexed with gol, w7e
    4. 2232977Domain d4al4d2: 4al4 D:160-331 [219027]
      Other proteins in same PDB: d4al4a1, d4al4b1, d4al4c1, d4al4d1
      automated match to d9ldta2
      complexed with gol, w7e
  13. Domain(s) for 5es3:
    1. 2233010Domain d5es3a2: 5es3 A:160-331 [280359]
      Other proteins in same PDB: d5es3a1, d5es3b1, d5es3c1, d5es3d1, d5es3e1, d5es3f1, d5es3g1, d5es3h1
      automated match to d9ldta2
      complexed with oxm
    2. 2233011Domain d5es3b2: 5es3 B:160-331 [280355]
      Other proteins in same PDB: d5es3a1, d5es3b1, d5es3c1, d5es3d1, d5es3e1, d5es3f1, d5es3g1, d5es3h1
      automated match to d9ldta2
      complexed with oxm
    3. 2233012Domain d5es3c2: 5es3 C:160-331 [280357]
      Other proteins in same PDB: d5es3a1, d5es3b1, d5es3c1, d5es3d1, d5es3e1, d5es3f1, d5es3g1, d5es3h1
      automated match to d9ldta2
      complexed with oxm
    4. 2233013Domain d5es3d2: 5es3 D:160-331 [280373]
      Other proteins in same PDB: d5es3a1, d5es3b1, d5es3c1, d5es3d1, d5es3e1, d5es3f1, d5es3g1, d5es3h1
      automated match to d9ldta2
      complexed with oxm
    5. 2233014Domain d5es3e2: 5es3 E:160-331 [280365]
      Other proteins in same PDB: d5es3a1, d5es3b1, d5es3c1, d5es3d1, d5es3e1, d5es3f1, d5es3g1, d5es3h1
      automated match to d9ldta2
      complexed with oxm
    6. 2233015Domain d5es3f2: 5es3 F:160-331 [280369]
      Other proteins in same PDB: d5es3a1, d5es3b1, d5es3c1, d5es3d1, d5es3e1, d5es3f1, d5es3g1, d5es3h1
      automated match to d9ldta2
      complexed with oxm
    7. 2233016Domain d5es3g2: 5es3 G:160-331 [280371]
      Other proteins in same PDB: d5es3a1, d5es3b1, d5es3c1, d5es3d1, d5es3e1, d5es3f1, d5es3g1, d5es3h1
      automated match to d9ldta2
      complexed with oxm
    8. 2233017Domain d5es3h2: 5es3 H:160-331 [280367]
      Other proteins in same PDB: d5es3a1, d5es3b1, d5es3c1, d5es3d1, d5es3e1, d5es3f1, d5es3g1, d5es3h1
      automated match to d9ldta2
      complexed with oxm

More info for Species Norway rat (Rattus norvegicus) [TaxId:10116] from d.162.1.1 automated matches

Timeline for Species Norway rat (Rattus norvegicus) [TaxId:10116] from d.162.1.1 automated matches: