Class c: Alpha and beta proteins (a/b) [51349] (148 folds) |
Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies) 3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest |
Superfamily c.55.3: Ribonuclease H-like [53098] (18 families) consists of one domain of this fold |
Family c.55.3.0: automated matches [191357] (1 protein) not a true family |
Protein automated matches [190396] (40 species) not a true protein |
Species Human immunodeficiency virus type 1 [TaxId:11678] [225971] (19 PDB entries) |
Domain d3klia2: 3kli A:430-551 [212412] Other proteins in same PDB: d3klia1, d3klib_ automated match to d1bqna1 |
Domain d3qlha2: 3qlh A:430-554 [215287] Other proteins in same PDB: d3qlha1, d3qlha3, d3qlhb_ automated match to d1hqea1 complexed with dms, edo, mn, mnk, t27 |
Domain d4dg1a2: 4dg1 A:430-549 [219745] Other proteins in same PDB: d4dg1a1, d4dg1b_ automated match to d1hqea1 complexed with edo, gol, mg; mutant |
Domain d4g1qa2: 4g1q A:430-554 [221663] Other proteins in same PDB: d4g1qa1, d4g1qa3, d4g1qb_ automated match to d1bqna1 protein/DNA complex; protein/RNA complex; complexed with edo, mg, so4, t27 |
Domain d4h4ma2: 4h4m A:430-548 [222382] Other proteins in same PDB: d4h4ma1, d4h4mb_ automated match to d1bqna1 complexed with 494, edo |
Domain d4i7ga2: 4i7g A:430-554 [307536] Other proteins in same PDB: d4i7ga1, d4i7gb_ automated match to d1dloa1 protein/DNA complex; protein/RNA complex; complexed with 1cj, dms, t27 |
Domain d4icla2: 4icl A:430-554 [223123] Other proteins in same PDB: d4icla1, d4icla3, d4iclb_ automated match to d1bqna1 protein/DNA complex; protein/RNA complex; complexed with 14n, dms, mg, t27 |
Domain d4id5a2: 4id5 A:430-554 [223126] Other proteins in same PDB: d4id5a1, d4id5a3, d4id5b_ automated match to d1bqna1 protein/DNA complex; protein/RNA complex; complexed with 1ff, dms, mg, t27 |
Domain d4idka2: 4idk A:430-554 [223129] Other proteins in same PDB: d4idka1, d4idka3, d4idkb_ automated match to d1bqna1 protein/DNA complex; protein/RNA complex; complexed with 1fe, dms, mg, t27 |
Domain d4ifva2: 4ifv A:430-554 [223150] Other proteins in same PDB: d4ifva1, d4ifva3, d4ifvb_ automated match to d1bqna1 protein/DNA complex; protein/RNA complex; complexed with dms, fmq, mg, t27 |
Domain d4ifya2: 4ify A:430-554 [223153] Other proteins in same PDB: d4ifya1, d4ifya3, d4ifyb_ automated match to d1bqna1 protein/DNA complex; protein/RNA complex; complexed with 1fd, dms, mg, t27 |
Domain d4ig0a2: 4ig0 A:430-554 [223156] Other proteins in same PDB: d4ig0a1, d4ig0a3, d4ig0b_ automated match to d1bqna1 protein/DNA complex; protein/RNA complex; complexed with 1fg, dms |
Domain d4ig3a2: 4ig3 A:430-554 [223159] Other proteins in same PDB: d4ig3a1, d4ig3a3, d4ig3b_ automated match to d1bqna1 protein/DNA complex; protein/RNA complex; complexed with dms, j94, t27 |
Domain d4kfba2: 4kfb A:430-554 [224284] Other proteins in same PDB: d4kfba1, d4kfba3, d4kfbb_ automated match to d1bqna1 protein/DNA complex; protein/RNA complex; complexed with 1qp, dms, t27 |
Domain d4ko0a2: 4ko0 A:430-554 [227596] Other proteins in same PDB: d4ko0a1, d4ko0a3, d4ko0b_ automated match to d4g1qa2 protein/DNA complex; protein/RNA complex; complexed with edo, jlj, so4 |
Domain d4lsna2: 4lsn A:430-548 [266697] Other proteins in same PDB: d4lsna1, d4lsna3, d4lsnb_ automated match to d2ykna2 complexed with 1yr |
Domain d4pqua2: 4pqu A:430-545 [257525] Other proteins in same PDB: d4pqua1, d4pqub_, d4pquc1, d4pqud_ automated match to d2ykna2 protein/DNA complex; protein/RNA complex; complexed with dtp, edo, gol, mg, so4 |
Domain d4pquc2: 4pqu C:430-545 [258230] Other proteins in same PDB: d4pqua1, d4pqub_, d4pquc1, d4pqud_ automated match to d2ykna2 protein/DNA complex; protein/RNA complex; complexed with dtp, edo, gol, mg, so4 |
Domain d4puoa2: 4puo A:430-554 [263570] Other proteins in same PDB: d4puoa1, d4puoa3, d4puob_, d4puoc1, d4puoc3, d4puod_ automated match to d2ykna2 protein/DNA complex; protein/RNA complex; complexed with nvp |
Domain d4puoc2: 4puo C:430-554 [263572] Other proteins in same PDB: d4puoa1, d4puoa3, d4puob_, d4puoc1, d4puoc3, d4puod_ automated match to d2ykna2 protein/DNA complex; protein/RNA complex; complexed with nvp |
Domain d4pwda2: 4pwd A:430-554 [263580] Other proteins in same PDB: d4pwda1, d4pwda3, d4pwdb_, d4pwdc1, d4pwdc3, d4pwdd_ automated match to d2ykna2 protein/DNA complex; protein/RNA complex; complexed with ca, nvp, so4 |
Domain d4pwdc2: 4pwd C:430-554 [263582] Other proteins in same PDB: d4pwda1, d4pwda3, d4pwdb_, d4pwdc1, d4pwdc3, d4pwdd_ automated match to d2ykna2 protein/DNA complex; protein/RNA complex; complexed with ca, nvp, so4 |
Timeline for Species Human immunodeficiency virus type 1 [TaxId:11678] from c.55.3.0 automated matches: