Lineage for Species: Ruminococcus gnavus [TaxId: 411470]

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2492802Fold c.119: DAK1/DegV-like [82548] (1 superfamily)
    2 different domains; d1: [core: 3 layers, a/b/a; parallel sheet of 5 strands, order: 2134]; D2: [2 layers, a/b; mixed sheet of 6 strands, order 321645; strands 2 and 6 are antiparallel to the rest]
  4. 2492803Superfamily c.119.1: DAK1/DegV-like [82549] (3 families) (S)
    domain folds and architecture show some similarity to the tubulin-like GTPases; the nucleotide-binding sites of the Dihydroxyacetone kinase and tubulin families are different
  5. 2492850Family c.119.1.0: automated matches [191443] (1 protein)
    not a true family
  6. 2492851Protein automated matches [190655] (11 species)
    not a true protein
  7. 2492867Species Ruminococcus gnavus [TaxId:411470] [225774] (2 PDB entries)

PDB entries in Species: Ruminococcus gnavus [TaxId: 411470]:

  1. Domain(s) for 3jr7:
    1. 2492868Domain d3jr7a_: 3jr7 A: [212056]
      automated match to d2g7za_
      complexed with na, pg6, po4
    2. 2492869Domain d3jr7b_: 3jr7 B: [212057]
      automated match to d2g7za_
      complexed with na, pg6, po4
  2. Domain(s) for 5v85:
    1. 3060430Domain d5v85b_: 5v85 B: [360492]
      automated match to d3jr7a_
      complexed with na, po4, vca
    2. 3060451Domain d5v85a_: 5v85 A: [360513]
      automated match to d3jr7a_
      complexed with na, po4, vca

More info for Species Ruminococcus gnavus [TaxId:411470] from c.119.1.0 automated matches

Timeline for Species Ruminococcus gnavus [TaxId:411470] from c.119.1.0 automated matches: