Lineage for Species: Roseovarius nubinhibens [TaxId: 89187]

  1. Root: SCOPe 2.04
  2. 1565955Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1565956Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 1573508Superfamily c.1.11: Enolase C-terminal domain-like [51604] (3 families) (S)
    binds metal ion (magnesium or manganese) in conserved site inside barrel
    N-terminal alpha+beta domain is common to this superfamily
  5. 1573839Family c.1.11.0: automated matches [227196] (1 protein)
    not a true family
  6. 1573840Protein automated matches [226923] (59 species)
    not a true protein
  7. 1574148Species Roseovarius nubinhibens [TaxId:89187] [225251] (5 PDB entries)

PDB entries in Species: Roseovarius nubinhibens [TaxId: 89187]:

  1. Domain(s) for 2pce:
    1. 1574164Domain d2pcea2: 2pce A:128-372 [205496]
      Other proteins in same PDB: d2pcea1, d2pceb1, d2pcec1, d2pced1, d2pcee1, d2pcef1, d2pceg1, d2pceh1
      automated match to d1jpma1
      complexed with po4
    2. 1574165Domain d2pceb2: 2pce B:128-372 [205498]
      Other proteins in same PDB: d2pcea1, d2pceb1, d2pcec1, d2pced1, d2pcee1, d2pcef1, d2pceg1, d2pceh1
      automated match to d1jpma1
      complexed with po4
    3. 1574166Domain d2pcec2: 2pce C:128-372 [205500]
      Other proteins in same PDB: d2pcea1, d2pceb1, d2pcec1, d2pced1, d2pcee1, d2pcef1, d2pceg1, d2pceh1
      automated match to d1jpma1
      complexed with po4
    4. 1574167Domain d2pced2: 2pce D:128-372 [205502]
      Other proteins in same PDB: d2pcea1, d2pceb1, d2pcec1, d2pced1, d2pcee1, d2pcef1, d2pceg1, d2pceh1
      automated match to d1jpma1
      complexed with po4
    5. 1574168Domain d2pcee2: 2pce E:128-372 [205504]
      Other proteins in same PDB: d2pcea1, d2pceb1, d2pcec1, d2pced1, d2pcee1, d2pcef1, d2pceg1, d2pceh1
      automated match to d1jpma1
      complexed with po4
    6. 1574169Domain d2pcef2: 2pce F:128-372 [205506]
      Other proteins in same PDB: d2pcea1, d2pceb1, d2pcec1, d2pced1, d2pcee1, d2pcef1, d2pceg1, d2pceh1
      automated match to d1jpma1
      complexed with po4
    7. 1574170Domain d2pceg2: 2pce G:128-372 [205508]
      Other proteins in same PDB: d2pcea1, d2pceb1, d2pcec1, d2pced1, d2pcee1, d2pcef1, d2pceg1, d2pceh1
      automated match to d1jpma1
      complexed with po4
    8. 1574171Domain d2pceh2: 2pce H:128-372 [205510]
      Other proteins in same PDB: d2pcea1, d2pceb1, d2pcec1, d2pced1, d2pcee1, d2pcef1, d2pceg1, d2pceh1
      automated match to d1jpma1
      complexed with po4
  2. Domain(s) for 2qdd:
    1. 1574174Domain d2qdda2: 2qdd A:128-369 [231200]
      Other proteins in same PDB: d2qdda1, d2qddb1
      automated match to d3eeza2
      complexed with gol
    2. 1574175Domain d2qddb2: 2qdd B:128-376 [231202]
      Other proteins in same PDB: d2qdda1, d2qddb1
      automated match to d3eeza2
      complexed with gol
  3. Domain(s) for 2rdx:
    1. 1574157Domain d2rdxa2: 2rdx A:128-368 [231270]
      Other proteins in same PDB: d2rdxa1, d2rdxb1, d2rdxc1, d2rdxd1, d2rdxe1, d2rdxf1, d2rdxg1, d2rdxh1
      automated match to d4mggf2
      complexed with gol, mg
    2. 1574158Domain d2rdxb2: 2rdx B:128-368 [231264]
      Other proteins in same PDB: d2rdxa1, d2rdxb1, d2rdxc1, d2rdxd1, d2rdxe1, d2rdxf1, d2rdxg1, d2rdxh1
      automated match to d4mggf2
      complexed with gol, mg
    3. 1574159Domain d2rdxc2: 2rdx C:128-368 [231266]
      Other proteins in same PDB: d2rdxa1, d2rdxb1, d2rdxc1, d2rdxd1, d2rdxe1, d2rdxf1, d2rdxg1, d2rdxh1
      automated match to d4mggf2
      complexed with gol, mg
    4. 1574160Domain d2rdxd2: 2rdx D:128-368 [231268]
      Other proteins in same PDB: d2rdxa1, d2rdxb1, d2rdxc1, d2rdxd1, d2rdxe1, d2rdxf1, d2rdxg1, d2rdxh1
      automated match to d4mggf2
      complexed with gol, mg
    5. 1574161Domain d2rdxe2: 2rdx E:128-371 [231272]
      Other proteins in same PDB: d2rdxa1, d2rdxb1, d2rdxc1, d2rdxd1, d2rdxe1, d2rdxf1, d2rdxg1, d2rdxh1
      automated match to d4mggf2
      complexed with gol, mg
    6. 1574162Domain d2rdxg2: 2rdx G:128-369 [238855]
      Other proteins in same PDB: d2rdxa1, d2rdxb1, d2rdxc1, d2rdxd1, d2rdxe1, d2rdxf1, d2rdxg1, d2rdxh1
      automated match to d2rdxe2
      complexed with gol, mg
    7. 1574163Domain d2rdxh2: 2rdx H:128-368 [238857]
      Other proteins in same PDB: d2rdxa1, d2rdxb1, d2rdxc1, d2rdxd1, d2rdxe1, d2rdxf1, d2rdxg1, d2rdxh1
      automated match to d2rdxb2
      complexed with gol, mg
  4. Domain(s) for 3fv9:
    1. 1574149Domain d3fv9a2: 3fv9 A:128-374 [210201]
      Other proteins in same PDB: d3fv9a1, d3fv9b1, d3fv9c1, d3fv9d1, d3fv9e1, d3fv9f1, d3fv9g1, d3fv9h1
      automated match to d1jpma1
      complexed with mg
    2. 1574150Domain d3fv9b2: 3fv9 B:128-373 [210203]
      Other proteins in same PDB: d3fv9a1, d3fv9b1, d3fv9c1, d3fv9d1, d3fv9e1, d3fv9f1, d3fv9g1, d3fv9h1
      automated match to d1jpma1
      complexed with mg
    3. 1574151Domain d3fv9c2: 3fv9 C:128-374 [210205]
      Other proteins in same PDB: d3fv9a1, d3fv9b1, d3fv9c1, d3fv9d1, d3fv9e1, d3fv9f1, d3fv9g1, d3fv9h1
      automated match to d1jpma1
      complexed with mg
    4. 1574152Domain d3fv9d2: 3fv9 D:128-373 [210207]
      Other proteins in same PDB: d3fv9a1, d3fv9b1, d3fv9c1, d3fv9d1, d3fv9e1, d3fv9f1, d3fv9g1, d3fv9h1
      automated match to d1jpma1
      complexed with mg
    5. 1574153Domain d3fv9e2: 3fv9 E:128-373 [210209]
      Other proteins in same PDB: d3fv9a1, d3fv9b1, d3fv9c1, d3fv9d1, d3fv9e1, d3fv9f1, d3fv9g1, d3fv9h1
      automated match to d1jpma1
      complexed with mg
    6. 1574154Domain d3fv9f2: 3fv9 F:128-373 [210211]
      Other proteins in same PDB: d3fv9a1, d3fv9b1, d3fv9c1, d3fv9d1, d3fv9e1, d3fv9f1, d3fv9g1, d3fv9h1
      automated match to d1jpma1
      complexed with mg
    7. 1574155Domain d3fv9g2: 3fv9 G:128-373 [210213]
      Other proteins in same PDB: d3fv9a1, d3fv9b1, d3fv9c1, d3fv9d1, d3fv9e1, d3fv9f1, d3fv9g1, d3fv9h1
      automated match to d1jpma1
      complexed with mg
    8. 1574156Domain d3fv9h2: 3fv9 H:128-374 [210215]
      Other proteins in same PDB: d3fv9a1, d3fv9b1, d3fv9c1, d3fv9d1, d3fv9e1, d3fv9f1, d3fv9g1, d3fv9h1
      automated match to d1jpma1
      complexed with mg
  5. Domain(s) for 3fvd:
    1. 1574172Domain d3fvda2: 3fvd A:128-369 [246189]
      Other proteins in same PDB: d3fvda1, d3fvdb1
      automated match to d2qdda2
      complexed with mg
    2. 1574173Domain d3fvdb2: 3fvd B:128-369 [246191]
      Other proteins in same PDB: d3fvda1, d3fvdb1
      automated match to d2qdda2
      complexed with mg

More info for Species Roseovarius nubinhibens [TaxId:89187] from c.1.11.0 automated matches

Timeline for Species Roseovarius nubinhibens [TaxId:89187] from c.1.11.0 automated matches: