SCOPe 2.06: Domain d4llta1: 4llt A:1-289

Lineage for d4llta1 (4llt A:1-289)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.128: Terpenoid synthases [48575] (1 superfamily)
   multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers

4. Superfamily a.128.1: Terpenoid synthases [48576] (6 families)
   duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J

5. Family a.128.1.0: automated matches [196408] (1 protein)
   not a true family

6. Protein automated matches [196409] (37 species)
   not a true protein

7. Species Roseobacter denitrificans [TaxId:375451] [226733] (2 PDB entries)

8. Domain d4llta1: 4llt A:1-289 [224703]
   Other proteins in same PDB: d4llta2, d4lltb2
   automated match to d3lvsa_
   complexed with ca, ipe

Details for d4llta1

PDB Entry: 4llt, 1.55 Å

PDB Description: crystal structure of a farnesyl diphosphate synthase from roseobacter denitrificans och 114, target efi-509393, with two ipp and calcium bound in active site

PDB Compounds: (A:) Geranyltranstransferase

SCOPe Domain Sequences for d4llta1:

Sequence; same for both SEQRES and ATOM records:

>d4llta1 a.128.1.0 (A:1-289) automated matches {Roseobacter denitrificans [TaxId: 375451]}
mftqrldaaaaavqahfdkvlaafeplpiveamahatsggkrlrgflvletarlhdiaag
eaiwsataiealhayslvhddlpcmdnddmrrgqptvhkkwddatavlagdalqtlafel
vthpgasasaevradlalslarasgaqgmvlgqaldiaaetaraplsldeitrlqqgktg
aligwsaqagarlaqadtaalkryaqalglafqiaddildvtgdsaqvgkavgkdasagk
atfvsllgldaararamslideacdslatygakadtlretarfvvrrth

Timeline for d4llta1:

• d4llta1 first appeared in SCOPe 2.03, called d4llta_
  
• d4llta1 was called d4llta_ in SCOPe 2.05
  
• d4llta1 appears in SCOPe 2.07
  
• d4llta1 appears in the current release, SCOPe 2.08