Lineage for d4jkcb_ (4jkc B:)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2460924Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 2462855Superfamily c.55.3: Ribonuclease H-like [53098] (16 families) (S)
    consists of one domain of this fold
  5. 2463945Family c.55.3.14: Prp8 beta-finger domain-like [159638] (1 protein)
    automatically mapped to Pfam PF12134
  6. 2463946Protein Pre-mRNA splicing factor 8, Prp8 / Spp42 [159639] (4 species)
  7. 2463960Species Human (Homo sapiens) [TaxId:9606] [159640] (13 PDB entries)
    Uniprot Q6P2Q9 1760-2016! Uniprot Q6P2Q9 1771-1989
  8. 2463970Domain d4jkcb_: 4jkc B: [223863]
    automated match to d3enba1
    complexed with cl, gol, mg

Details for d4jkcb_

PDB Entry: 4jkc (more details), 1.5 Å

PDB Description: Open and closed forms of T1800E human PRP8 RNase H-like domain with bound Mg ion
PDB Compounds: (B:) Pre-mRNA-processing-splicing factor 8

SCOPe Domain Sequences for d4jkcb_:

Sequence, based on SEQRES records: (download)

>d4jkcb_ c.55.3.14 (B:) Pre-mRNA splicing factor 8, Prp8 / Spp42 {Human (Homo sapiens) [TaxId: 9606]}

Sequence, based on observed residues (ATOM records): (download)

>d4jkcb_ c.55.3.14 (B:) Pre-mRNA splicing factor 8, Prp8 / Spp42 {Human (Homo sapiens) [TaxId: 9606]}

SCOPe Domain Coordinates for d4jkcb_:

Click to download the PDB-style file with coordinates for d4jkcb_.
(The format of our PDB-style files is described here.)

Timeline for d4jkcb_: