Lineage for d4ifva2 (4ifv A:430-554)

  1. Root: SCOPe 2.04
  2. 1565955Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1605035Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 1606596Superfamily c.55.3: Ribonuclease H-like [53098] (15 families) (S)
    consists of one domain of this fold
  5. 1607696Family c.55.3.0: automated matches [191357] (1 protein)
    not a true family
  6. 1607697Protein automated matches [190396] (26 species)
    not a true protein
  7. 1607810Species Human immunodeficiency virus type 1 [TaxId:11678] [225971] (15 PDB entries)
  8. 1607816Domain d4ifva2: 4ifv A:430-554 [223150]
    Other proteins in same PDB: d4ifva1, d4ifvb_
    automated match to d1bqna1
    protein/DNA complex; protein/RNA complex; complexed with dms, fmq, mg, t27

Details for d4ifva2

PDB Entry: 4ifv (more details), 2.05 Å

PDB Description: detecting allosteric sites of hiv-1 reverse transcriptase by x-ray crystallographic fragment screening
PDB Compounds: (A:) Exoribonuclease H, p66 RT

SCOPe Domain Sequences for d4ifva2:

Sequence; same for both SEQRES and ATOM records: (download)

>d4ifva2 c.55.3.0 (A:430-554) automated matches {Human immunodeficiency virus type 1 [TaxId: 11678]}
ekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnqktelqaiylalqds
glevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvd
klvsa

SCOPe Domain Coordinates for d4ifva2:

Click to download the PDB-style file with coordinates for d4ifva2.
(The format of our PDB-style files is described here.)

Timeline for d4ifva2:

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Domains from same chain:
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d4ifva1
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Domains from other chains:
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d4ifvb_