Lineage for d4gvfb_ (4gvf B:)

  1. Root: SCOPe 2.04
  2. 1565955Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1565956Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
    contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
    the first seven superfamilies have similar phosphate-binding sites
  4. 1568602Superfamily c.1.8: (Trans)glycosidases [51445] (15 families) (S)
  5. 1570672Family c.1.8.0: automated matches [191314] (1 protein)
    not a true family
  6. 1570673Protein automated matches [190075] (60 species)
    not a true protein
  7. 1570994Species Salmonella enterica [TaxId:99287] [194211] (5 PDB entries)
  8. 1570996Domain d4gvfb_: 4gvf B: [222205]
    automated match to d4gvhb_
    complexed with mes, nag, ndg

Details for d4gvfb_

PDB Entry: 4gvf (more details), 1.35 Å

PDB Description: crystal structure of salmonella typhimurium family 3 glycoside hydrolase (nagz) bound to glcnac
PDB Compounds: (B:) Beta-hexosaminidase

SCOPe Domain Sequences for d4gvfb_:

Sequence, based on SEQRES records: (download)

>d4gvfb_ c.1.8.0 (B:) automated matches {Salmonella enterica [TaxId: 99287]}
mgpvmlnvegceldaeereilahplvgglilftrnyhdpeqlrelvrqiraasrnhlvva
vdqeggrvqrfregftrlpaaqsffalhgleeggrlaqeagwlmasemiamdidisfapv
ldvghisaaigersyhadpakalamatrfidgmhdagmkttgkhfpghgavtadshketp
cdprpetdirgkdmsvfrtlisenkldaimpahviyraidprpasgspywlktvlrqelg
fdgvifsddlsmegaaimgsyaeraqasldagcdmilvcnnrkgavsvldnlspikaerv
trlyhkgsfsrrelmdsarwktasaqlnqlherwqeekagh

Sequence, based on observed residues (ATOM records): (download)

>d4gvfb_ c.1.8.0 (B:) automated matches {Salmonella enterica [TaxId: 99287]}
mgpvmlnvegceldaeereilahplvgglilftrnyhdpeqlrelvrqiraasrnhlvva
vdqeggrvqrfregftrlpaaqsffalhgleeggrlaqeagwlmasemiamdidisfapv
ldvghisaaigersyhadpakalamatrfidgmhdagmkttgkhfpghgavtetpcdprp
etdirgkdmsvfrtlisenkldaimpahviyraidprpasgspywlktvlrqelgfdgvi
fsddlssyaeraqasldagcdmilvcnnrkgavsvldnlspikaervtrlyhkgsfsrre
lmdsarwktasaqlnqlherwqeekagh

SCOPe Domain Coordinates for d4gvfb_:

Click to download the PDB-style file with coordinates for d4gvfb_.
(The format of our PDB-style files is described here.)

Timeline for d4gvfb_: