Lineage for d4gp8a_ (4gp8 A:)

  1. Root: SCOPe 2.04
  2. 1695624Class f: Membrane and cell surface proteins and peptides [56835] (57 folds)
  3. 1698770Fold f.24: Cytochrome c oxidase subunit I-like [81443] (1 superfamily)
    12 transmembrane helices in an approximate threefold rotational symmetric arrangement
  4. 1698771Superfamily f.24.1: Cytochrome c oxidase subunit I-like [81442] (1 family) (S)
  5. 1698772Family f.24.1.1: Cytochrome c oxidase subunit I-like [81441] (5 proteins)
    the largest and best conserved subunit, contains two heme groups, low spin heme a and high spin heme a3
  6. 1698790Protein Bacterial ba3 type cytochrome c oxidase subunit I [81438] (1 species)
  7. 1698791Species Thermus thermophilus [TaxId:274] [81437] (25 PDB entries)
  8. 1698799Domain d4gp8a_: 4gp8 A: [222069]
    Other proteins in same PDB: d4gp8b1, d4gp8b2, d4gp8c_
    automated match to d2qpea_
    complexed with cu, cua, has, hem, olc, per; mutant

Details for d4gp8a_

PDB Entry: 4gp8 (more details), 2.8 Å

PDB Description: Structure of Recombinant Cytochrome ba3 Oxidase mutant Y133W+T231F from Thermus thermophilus
PDB Compounds: (A:) Cytochrome c oxidase subunit 1

SCOPe Domain Sequences for d4gp8a_:

Sequence, based on SEQRES records: (download)

>d4gp8a_ f.24.1.1 (A:) Bacterial ba3 type cytochrome c oxidase subunit I {Thermus thermophilus [TaxId: 274]}
ypekkatlyflvlgflalivgslfgpfqalnygnvdaypllkrllpfvqsyyqgltlhgv
lnaivftqlfaqaimvylparelnmrpnmglmwlswwmafiglvvaalpllaneatvlwt
fypplkghwafylgasvfvlstwvsiyivldlwrrwkaanpgkvtplvtymavvfwlmwf
laslglvleavlfllpwsfglvegvdplvartlfwwfghpivyfwllpayaiiytilpkq
aggklvsdpmarlafllflllstpvgfhhqfadpgidptwkmihsvltlfvavpslmtaf
tvaaslefagrlrggrglfgwiralpwdnpafvapvlgllgfipggaggivnasftldyv
vhntawvpghfhlqvaslvtltamgslywllpnltgkpisdaqrrlglavvwlwflgmmi
mavglhwagllnvprrayiaqvpdayphaavpmvfnvlagivllvalllfiyglfsvlls
rerkpelaeaplpfaevisgpedrrlvlamdrigfwfavaailvvlaygptlvqlfghln
pvpgwrlw

Sequence, based on observed residues (ATOM records): (download)

>d4gp8a_ f.24.1.1 (A:) Bacterial ba3 type cytochrome c oxidase subunit I {Thermus thermophilus [TaxId: 274]}
ypekkatlyflvlgflalivgslfgpfqalnygnvdaypllkrllpfvqsyyqgltlhgv
lnaivftqlfaqaimvylparelnmrpnmglmwlswwmafiglvvaalpllaneatvlwt
fypplkghwafylgasvfvlstwvsiyivldlwrrwkaanpgkvtplvtymavvfwlmwf
laslglvleavlfllpwsfglvegvdplvartlfwwfghpivyfwllpayaiiytilpkq
aggklvsdpmarlafllflllstpvgfhhqfadpgidptwkmihsvltlfvavpslmtaf
tvaaslefagrlrggrglfgwiralpwdnpafvapvlgllgfipggaggivnasftldyv
vhntawvpghfhlqvaslvtltamgslywllpnltgkpisdaqrrlglavvwlwflgmmi
mavglhwagllnvprrayiaqvpdayphaavpmvfnvlagivllvalllfiyglfplpfa
evidrrlvlamdrigfwfavaailvvlaygptlvqlfghlnpvpgwrlw

SCOPe Domain Coordinates for d4gp8a_:

Click to download the PDB-style file with coordinates for d4gp8a_.
(The format of our PDB-style files is described here.)

Timeline for d4gp8a_: