Lineage for d4gfdb_ (4gfd B:)

  1. Root: SCOPe 2.04
  2. 1565955Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 1593542Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
    3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes
  4. 1593543Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (25 families) (S)
    division into families based on beta-sheet topologies
  5. 1597921Family c.37.1.0: automated matches [191323] (1 protein)
    not a true family
  6. 1597922Protein automated matches [190123] (79 species)
    not a true protein
  7. 1598515Species Staphylococcus aureus [TaxId:158879] [224890] (4 PDB entries)
  8. 1598519Domain d4gfdb_: 4gfd B: [221884]
    automated match to d2ccka_
    complexed with 0yb

Details for d4gfdb_

PDB Entry: 4gfd (more details), 1.8 Å

PDB Description: Thymidylate kinase (TMK) from S. Aureus in complex with TK-666
PDB Compounds: (B:) thymidylate kinase

SCOPe Domain Sequences for d4gfdb_:

Sequence, based on SEQRES records: (download)

>d4gfdb_ c.37.1.0 (B:) automated matches {Staphylococcus aureus [TaxId: 158879]}
safitfegpegsgkttvinevyhrlvkdydvimtrepggvptgeeirkivlegndmdirt
eamlfaasrrehlvlkvipalkegkvvlcdryidsslayqgyargigveevralnefain
glypdltiylnvsaevgreriiknsrdqnrldqedlkfhekviegyqeiihnesqrfksv
nadqplenvvedtyqtiikyleki

Sequence, based on observed residues (ATOM records): (download)

>d4gfdb_ c.37.1.0 (B:) automated matches {Staphylococcus aureus [TaxId: 158879]}
safitfegpegsgkttvinevyhrlvkdydvimtrepggvptgeeirkivlegdmdirte
amlfaasrrehlvlkvipalkegkvvlcdryidsslayqgyargigveevralnefaing
lypdltiylnvsaevgreridqedlkfhekviegyqeiihnesqrfksvnadqplenvve
dtyqtiikyleki

SCOPe Domain Coordinates for d4gfdb_:

Click to download the PDB-style file with coordinates for d4gfdb_.
(The format of our PDB-style files is described here.)

Timeline for d4gfdb_: