Lineage for d4f7ub_ (4f7u B:)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2380450Fold b.38: Sm-like fold [50181] (5 superfamilies)
    core: barrel, open; n*=4, S*=8; meander; SH3-like topology
  4. 2380451Superfamily b.38.1: Sm-like ribonucleoproteins [50182] (7 families) (S)
  5. 2380452Family b.38.1.1: Sm motif of small nuclear ribonucleoproteins, SNRNP [50183] (11 proteins)
    forms homo and heteroheptameric ring structures
    Pfam PF01423
  6. 2380665Protein D2 core SNRNP protein [50186] (3 species)
    3jb9 chains G and l are D2 subunits from fission yeast; not included because sids are not case sensitive
  7. 2380681Species Mouse (Mus musculus) [TaxId:10090] [224862] (1 PDB entry)
  8. 2380682Domain d4f7ub_: 4f7u B: [221063]
    Other proteins in same PDB: d4f7ua_, d4f7uc_, d4f7ue_, d4f7uf_, d4f7ug_, d4f7uh_, d4f7ui_, d4f7uj_
    automated match to d1b34b_
    complexed with p6g

Details for d4f7ub_

PDB Entry: 4f7u (more details), 1.9 Å

PDB Description: the 6s snrnp assembly intermediate
PDB Compounds: (B:) Small nuclear ribonucleoprotein Sm D2

SCOPe Domain Sequences for d4f7ub_:

Sequence, based on SEQRES records: (download)

>d4f7ub_ b.38.1.1 (B:) D2 core SNRNP protein {Mouse (Mus musculus) [TaxId: 10090]}

Sequence, based on observed residues (ATOM records): (download)

>d4f7ub_ b.38.1.1 (B:) D2 core SNRNP protein {Mouse (Mus musculus) [TaxId: 10090]}

SCOPe Domain Coordinates for d4f7ub_:

Click to download the PDB-style file with coordinates for d4f7ub_.
(The format of our PDB-style files is described here.)

Timeline for d4f7ub_: