SCOPe 2.04: Domain d4ejob_: 4ejo B:

Lineage for d4ejob_ (4ejo B:)

1. Root: SCOPe 2.04

2. Class a: All alpha proteins [46456] (285 folds)

3. Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
   core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down

4. Superfamily a.4.5: "Winged helix" DNA-binding domain [46785] (85 families)
   contains a small beta-sheet (wing)

5. Family a.4.5.0: automated matches [191329] (1 protein)
   not a true family

6. Protein automated matches [190154] (52 species)
   not a true protein

7. Species Eggerthella lenta [TaxId:479437] [226359] (1 PDB entry)

8. Domain d4ejob_: 4ejo B: [220587]
   automated match to d1xmab_
   complexed with eoh

Details for d4ejob_

PDB Entry: 4ejo, 2.1 Å

PDB Description: Crystal structure of padr family transcriptional regulator from Eggerthella lenta DSM 2243

PDB Compounds: (B:) Transcriptional regulator, PadR-like family

SCOPe Domain Sequences for d4ejob_:

Sequence, based on SEQRES records:

>d4ejob_ a.4.5.0 (B:) automated matches {Eggerthella lenta [TaxId: 479437]}
amayddivssmvlelrrgtlvmlvlsqlrepaygyalvksladhgipieantlyplmrrl
esqgllasewdnggskprkyyrttdeglrvlreveaqwhvlcdgvgklletngedr

Sequence, based on observed residues (ATOM records):

>d4ejob_ a.4.5.0 (B:) automated matches {Eggerthella lenta [TaxId: 479437]}
amayddivssmvlelrrgtlvmlvlsqlrepaygyalvksladhgipitlyplmrrlesq
gllasewdnggkprkyyrttdeglrvlreveaqwhvlcdgvgklletngedr

Timeline for d4ejob_:

• d4ejob_ first appeared in SCOPe 2.03
  
• d4ejob_ appears in SCOPe 2.05
  
• d4ejob_ appears in the current release, SCOPe 2.08, called d4ejob1