SCOPe 2.04: Domain d4egqa1: 4egq A:4-102

Lineage for d4egqa1 (4egq A:4-102)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.30: PreATP-grasp domain [52439] (1 superfamily)
   3 layers: a/b/a; parallel or mixed beta-sheet of 4 to 6 strands
   possible rudiment form of Rossmann-fold domain

4. Superfamily c.30.1: PreATP-grasp domain [52440] (9 families)
   precedes the ATP-grasp domain common to all superfamily members, can contain a substrate-binding function

5. Family c.30.1.0: automated matches [227183] (1 protein)
   not a true family

6. Protein automated matches [226903] (25 species)
   not a true protein

7. Species Burkholderia pseudomallei [TaxId:320372] [226351] (1 PDB entry)

8. Domain d4egqa1: 4egq A:4-102 [220526]
   Other proteins in same PDB: d4egqa2, d4egqb2, d4egqc2, d4egqd2
   automated match to d1e4ea1

Details for d4egqa1

PDB Entry: 4egq, 2.2 Å

PDB Description: crystal structure of d-alanine-d-alanine ligase b from burkholderia pseudomallei

PDB Compounds: (A:) d-alanine--d-alanine ligase

SCOPe Domain Sequences for d4egqa1:

Sequence; same for both SEQRES and ATOM records:

>d4egqa1 c.30.1.0 (A:4-102) automated matches {Burkholderia pseudomallei [TaxId: 320372]}
idpkrfgkvavllggdsaerevslnsgrlvlqglrdagidahpfdpaqrplaalkdegfv
rafnalhggygengqiqgaldfygirytgsgvlgsalgl

Timeline for d4egqa1:

• d4egqa1 first appeared in SCOPe 2.03
  
• d4egqa1 appears in SCOPe 2.05
  
• d4egqa1 appears in the current release, SCOPe 2.08