SCOPe 2.05: Domain d4e42d2: 4e42 D:111-238

Lineage for d4e42d2 (4e42 D:111-238)

1. Root: SCOPe 2.05

2. Class b: All beta proteins [48724] (176 folds)

3. Fold b.1: Immunoglobulin-like beta-sandwich [48725] (31 superfamilies)
   sandwich; 7 strands in 2 sheets; greek-key
   some members of the fold have additional strands

4. Superfamily b.1.1: Immunoglobulin [48726] (5 families)

5. Family b.1.1.2: C1 set domains (antibody constant domain-like) [48942] (24 proteins)

6. Protein automated matches [190374] (14 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187221] (409 PDB entries)

8. Domain d4e42d2: 4e42 D:111-238 [220271]
   Other proteins in same PDB: d4e42a1, d4e42b1, d4e42c1, d4e42d1
   automated match to d2esve2
   complexed with cl, na, no3; mutant

Details for d4e42d2

PDB Entry: 4e42, 2.7 Å

PDB Description: Structural basis for the recognition of mutant self by a tumor-specific, MHC class II-restricted T cell receptor G4

PDB Compounds: (D:) T cell receptor G4 beta chain

SCOPe Domain Sequences for d4e42d2:

Sequence, based on SEQRES records:

>d4e42d2 b.1.1.2 (D:111-238) automated matches {Human (Homo sapiens) [TaxId: 9606]}
dlknvfppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpq
plkeqpalndsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqiv
saeawgra

Sequence, based on observed residues (ATOM records):

>d4e42d2 b.1.1.2 (D:111-238) automated matches {Human (Homo sapiens) [TaxId: 9606]}
dlknvfppevavfepseaeishtqkatlvclatgfypdhvelswwvngkevhsgvctdpq
plkeqsryalssrlrvsatfwqnprnhfrcqvqfyglsendewtqdrakpvtqivsaeaw
gra

Timeline for d4e42d2:

• d4e42d2 first appeared in SCOPe 2.03
  
• d4e42d2 appears in SCOPe 2.04
  
• d4e42d2 appears in SCOPe 2.06
  
• d4e42d2 appears in the current release, SCOPe 2.08