Lineage for d1qrka1 (1qrk A:9-190)

  1. Root: SCOP 1.63
  2. 218896Class b: All beta proteins [48724] (119 folds)
  3. 218897Fold b.1: Immunoglobulin-like beta-sandwich [48725] (20 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 223262Superfamily b.1.18: E set domains [81296] (17 families) (S)
    "Early" Ig-like fold families possibly related to the immunoglobulin and/or fibronectin type III superfamilies
  5. 223518Family b.1.18.9: Transglutaminase N-terminal domain [81289] (1 protein)
  6. 223519Protein Transglutaminase N-terminal domain [49235] (4 species)
    elaborated with many loop insertions in the common fold
  7. 223520Species Human (Homo sapiens), blood isozyme [TaxId:9606] [49236] (7 PDB entries)
    Coagulation factor XIII
  8. 223529Domain d1qrka1: 1qrk A:9-190 [21889]
    Other proteins in same PDB: d1qrka2, d1qrka3, d1qrka4, d1qrkb2, d1qrkb3, d1qrkb4

Details for d1qrka1

PDB Entry: 1qrk (more details), 2.5 Å

PDB Description: human factor xiii with strontium bound in the ion site

SCOP Domain Sequences for d1qrka1:

Sequence, based on SEQRES records: (download)

>d1qrka1 b.1.18.9 (A:9-190) Transglutaminase N-terminal domain {Human (Homo sapiens), blood isozyme}
ggrravppnnsnaaeddlptvelqgvvprgvnlqeflnvtsvhlfkerwdtnkvdhhtdk
yennklivrrgqsfyvqidfsrpydprrdlfrveyvigrypqenkgtyipvpivselqsg
kwgakivmredrsvrlsiqsspkcivgkfrmyvavwtpygvlrtsrnpetdtyilfnpwc
ed

Sequence, based on observed residues (ATOM records): (download)

>d1qrka1 b.1.18.9 (A:9-190) Transglutaminase N-terminal domain {Human (Homo sapiens), blood isozyme}
ggrravppnnsnaaeddlptvelnvtsvhlfkerwdtnkvdhhtdkyennklivrrgqsf
yvqidfsrpydprrdlfrveyvigrypqenkgtyipvpivselqsgkwgakivmredrsv
rlsiqsspkcivgkfrmyvavwtpygvlrtsrnpetdtyilfnpwced

SCOP Domain Coordinates for d1qrka1:

Click to download the PDB-style file with coordinates for d1qrka1.
(The format of our PDB-style files is described here.)

Timeline for d1qrka1: